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SCNpilot_expt_1000_bf_scaffold_1252_curated_29

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(25667..25978)

Top 3 Functional Annotations

Value Algorithm Source
microcin C ABC transporter ATP-binding protein YejF n=1 Tax=Rhizobium leguminosarum RepID=UPI00036FF49C similarity UNIREF
DB: UNIREF100
  • Identity: 83.5
  • Coverage: 103.0
  • Bit_score: 170
  • Evalue 7.40e-40
Microcin ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGD98133.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.5
  • Coverage: 103.0
  • Bit_score: 171
  • Evalue 4.60e-40
ABC transporter ATP-binding protein; K13896 microcin C transport system ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 83.5
  • Coverage: 103.0
  • Bit_score: 170
  • Evalue 2.30e-40

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Taxonomy

Rhizobium sp. YS-1r → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 312
ATGGTGCTGAAACCGCGCTTCGTCATGCTCGACGAGCCGACCTCGGCGCTGGACATGAGCGTGCAGGCACAGGTCGTCGATCTGCTGCGCAACCTGCAGGCCAAGCACGACCTCGCCTATCTGTTCATCAGCCACGACCTGCGCGTCGTCAAAGCACTGTCGAACCATGTCATCGTCATGCGTTTCGGCAAGGTGGTGGAACAGGGGCCGGCGGAAGGCATTTTCGCCAAGCCCCGGGAAGATTACACCCGCGCCCTGATGGCCGCGGCCTTCAATCTCGAAGCCGTCCCCGTCGGCGGCGTCAAACAGTGA
PROTEIN sequence
Length: 104
MVLKPRFVMLDEPTSALDMSVQAQVVDLLRNLQAKHDLAYLFISHDLRVVKALSNHVIVMRFGKVVEQGPAEGIFAKPREDYTRALMAAAFNLEAVPVGGVKQ*