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SCNpilot_expt_1000_bf_scaffold_1898_curated_13

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(9883..10863)

Top 3 Functional Annotations

Value Algorithm Source
cobD; cobalamin biosynthesis protein; K02227 adenosylcobinamide-phosphate synthase [EC:6.3.1.10] similarity KEGG
DB: KEGG
  • Identity: 65.1
  • Coverage: 324.0
  • Bit_score: 419
  • Evalue 9.00e-115
Cobalamin biosynthesis protein CobD n=1 Tax=Rhizobium sp. CF142 RepID=J1TFM2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 67.6
  • Coverage: 324.0
  • Bit_score: 434
  • Evalue 1.10e-118
Cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.6
  • Coverage: 324.0
  • Bit_score: 434
  • Evalue 1.60e-118

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Taxonomy

Rhizobium sp. CF142 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 981
ATGACCGAACATTTTCTCATCCTGCTTCTGGCGCTGCTGCTCGACCGCATCGTCGGCGATCCCCCGGCGCTGTGGCGGCACGTTCCGCATCCAGTGGTGCTGTTCGGCAAGGCCATCGCCTTTGCCGATACGCGCCTCAACCGCCGTGCCCTGCCGCCGGCGCAGCGGCGGCGCAACGGCGTCATCGCCATTGCCGTGCTTCTGTTCCTGAGCGTCGCCTTCGGCTGCGGCCTGCATCTGCTGCTGGCGGTCCTCGGGCCGCTCGGCATCCTTATCGAGGTGGCGATCGCCGCTGTCTTTTTCGCGCAGAAAAGCCTGTCCGATCATGTGCTGGCCGTGGCGGAGGGTTTGAAGCGCGAGGGTCTTTCGGGAGGGCGTCGCGCCGTCAGCATGATCGTCGGGCGCGATCCGGAAACGCTGGACGAAGCCGGCATTTCCCGGGCGGCGCTGGAAAGCCTGGCGGAGAATTTTTCCGATGGCGTCGTCGCGCCCGCCTTCTGGTATGCGGCGCTCGGCCTGCCGGGGCTTATCGCCTACAAGATGCTCAACACCGCCGATTCGATGATCGGCCATCTCTCGGAAAAATACGCCGATTTCGGCTGGGCCTCGGCCAGGCTCGACGATCTCGCCAACTGGCCGGCCGCGCGCCTGTCGATGCTGCTGATCGCCGCCGGCGCCTGGGTTCATCGCGGAAGCGCTGCGGCGCGGGCCGCGATCGACCTCGGTCTGCGCGATCACGGCCTGCATCGCTCGCCGAATTCCGGCTGGCCGGAGGCGGCGATGGCGGGCGCGCTCGATCTCGCGCTTGCCGGCCCGCGCGTCTATGGTGGCGTGCAGGTGCGCGAGCCGATGATGAATGCGGCTGGCCGACAGGATGCGTCCGTCTTCGATATCGAAGCCGGTGTCGCCGTCTTCAAGCATGCCTGCTCGGCACTTGCCGCCATCGCCCTTGTCGCCTTCGTCATTCTGCTCGTCGTTTAA
PROTEIN sequence
Length: 327
MTEHFLILLLALLLDRIVGDPPALWRHVPHPVVLFGKAIAFADTRLNRRALPPAQRRRNGVIAIAVLLFLSVAFGCGLHLLLAVLGPLGILIEVAIAAVFFAQKSLSDHVLAVAEGLKREGLSGGRRAVSMIVGRDPETLDEAGISRAALESLAENFSDGVVAPAFWYAALGLPGLIAYKMLNTADSMIGHLSEKYADFGWASARLDDLANWPAARLSMLLIAAGAWVHRGSAAARAAIDLGLRDHGLHRSPNSGWPEAAMAGALDLALAGPRVYGGVQVREPMMNAAGRQDASVFDIEAGVAVFKHACSALAAIALVAFVILLVV*