name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_1898_curated_1
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(1..921)
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gnd; 6-phosphogluconate dehydrogenase (EC:1.1.1.44); K00033 6-phosphogluconate dehydrogenase [EC:1.1.1.44]
6-phosphogluconate dehydrogenase, decarboxylating {ECO:0000256|PIRNR:PIRNR000109, ECO:0000256|RuleBase:RU000485}; EC=1.1.1.44 {ECO:0000256|PIRNR:PIRNR000109, ECO:0000256|RuleBase:RU000485};; TaxID=1107544 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens 5A.;"
6-phosphogluconate dehydrogenase, decarboxylating n=2 Tax=Agrobacterium RepID=F0L4M0_AGRSH
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SCNpilot_expt_1000_bf_scaffold_1898_curated_2
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1056..1466
|
Uncharacterized protein n=1 Tax=Rhizobium sp. CF080 RepID=J2J2J4_9RHIZ
Strain MEJ076 contig_30, whole genome shotgun sequence {ECO:0000313|EMBL:KIP99134.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
hypothetical protein
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SCNpilot_expt_1000_bf_scaffold_1898_curated_3
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(1470..2171)
|
Uncharacterized protein n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JGA9_AGRRK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAJ91011.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;"
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SCNpilot_expt_1000_bf_scaffold_1898_curated_4
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2430..3152)
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Uncharacterized protein n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9A7J9_RHIFH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCE96229.1}; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;"
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SCNpilot_expt_1000_bf_scaffold_1898_curated_5
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(3385..4314)
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msbB; lipid A biosynthesis lauroyl acyltransferase; K02517 lipid A biosynthesis lauroyl acyltransferase [EC:2.3.1.-]
Lauroyl/myristoyl acyltransferase n=1 Tax=Rhizobium sp. AP16 RepID=J2WHE5_9RHIZ
Lipid A biosynthesis lauroyl acyltransferase {ECO:0000313|EMBL:KEA06521.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;"
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SCNpilot_expt_1000_bf_scaffold_1898_curated_6
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4319..5347)
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alcohol dehydrogenase; K00001 alcohol dehydrogenase [EC:1.1.1.1]
Alcohol dehydrogenase protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JGB1_AGRRK
Alcohol dehydrogenase protein {ECO:0000313|EMBL:ACM26886.1}; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter (strain K84 / ATCC BAA-868).;"
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SCNpilot_expt_1000_bf_scaffold_1898_curated_7
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5400..6704)
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Beta-ketoacyl-acyl-carrier-protein synthase II {ECO:0000313|EMBL:EUB96286.1}; EC=2.3.1.179 {ECO:0000313|EMBL:EUB96286.1};; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
fabF; 3-oxoacyl-ACP synthase (EC:2.3.1.41); K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
rbh
3-oxoacyl-(Acyl-carrier-protein) synthase n=1 Tax=Rhizobium sp. CF080 RepID=J2J2J0_9RHIZ
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SCNpilot_expt_1000_bf_scaffold_1898_curated_8
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6701..7903)
|
fabF3; 3-oxoacyl-ACP synthase (EC:2.3.1.41)
3-oxoacyl-(Acyl-carrier-protein) synthase n=1 Tax=Rhizobium sp. CF080 RepID=J3C1N2_9RHIZ
Beta-ketoacyl synthase {ECO:0000313|EMBL:CDN48191.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
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SCNpilot_expt_1000_bf_scaffold_1898_curated_9
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8030..8506)
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Putative (3R)-hydroxymyristoyl-[acyl carrier] dehydratase transmembrane protein n=1 Tax=Ensifer adhaerens RepID=I0FXG3_ENSAD
3-hydroxyacyl-ACP dehydratase {ECO:0000313|EMBL:KDP76360.1}; Putative (3R)-hydroxymyristoyl-[acyl carrier] dehydratase transmembrane protein {ECO:0000313|EMBL:BAL73200.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
(3R)-hydroxymyristoyl-ACP dehydratase
|
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SCNpilot_expt_1000_bf_scaffold_1898_curated_10
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8524..8802)
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Acyl carrier protein n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9JW18_AGRVS
acpP; acyl carrier protein
Acyl carrier protein {ECO:0000313|EMBL:ACM36446.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;"
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SCNpilot_expt_1000_bf_scaffold_1898_curated_11
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8985..9413)
|
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0KH57_RHILT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EJC76549.1}; Flags: Precursor;; TaxID=754522 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2012.;"
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SCNpilot_expt_1000_bf_scaffold_1898_curated_12
unknown
|
Not on your lists |
comp(9560..9832)
|
This feature has no annotations |
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SCNpilot_expt_1000_bf_scaffold_1898_curated_13
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9883..10863)
|
cobD; cobalamin biosynthesis protein; K02227 adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
Cobalamin biosynthesis protein CobD n=1 Tax=Rhizobium sp. CF142 RepID=J1TFM2_9RHIZ
Cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
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SCNpilot_expt_1000_bf_scaffold_1898_curated_14
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10964..11962)
|
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00035E432D
L-threonine-O-3-phosphate decarboxylase {ECO:0000313|EMBL:EJJ30700.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
cobC; pyridoxal-phosphate-dependent aminotransferase (cobalamin biosynthesis protein); K02225 cobalamin biosynthetic protein CobC
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SCNpilot_expt_1000_bf_scaffold_1898_curated_15
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11959..12231)
|
Hydrogenobyrinate a,c-diamide synthase {ECO:0000256|HAMAP-Rule:MF_00027}; EC=6.3.5.9 {ECO:0000256|HAMAP-Rule:MF_00027};; Hydrogenobyrinic acid a,c-diamide synthase {ECO:0000256|HAMAP-Rule:MF_00027}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
Cobyrinic acid A,C-diamide synthase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LLA8_RHITR
cobB; cobyrinic Acid a,c-diamide synthase
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SCNpilot_expt_1000_bf_scaffold_1898_curated_16
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12207..13262)
|
Hydrogenobyrinate a,c-diamide synthase {ECO:0000256|HAMAP-Rule:MF_00027}; EC=6.3.5.9 {ECO:0000256|HAMAP-Rule:MF_00027};; Hydrogenobyrinic acid a,c-diamide synthase {ECO:0000256|HAMAP-Rule:MF_00027}; Flags: Precursor;; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
Cobyrinic acid A,C-diamide synthase n=1 Tax=Rhizobium sp. AP16 RepID=J2CY18_9RHIZ
cobB; cobyrinic Acid a,c-diamide synthase
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SCNpilot_expt_1000_bf_scaffold_1898_curated_17
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13259..14098)
|
cobA; uroporphyrin-III C-methyltransferase; K02303 uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
Uroporphyrin-III C-methyltransferase n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QWL1_9RHIZ
Uroporphyrin-III C-methyltransferase {ECO:0000313|EMBL:EKF59727.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;"
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SCNpilot_expt_1000_bf_scaffold_1898_curated_18
Rhizobium nepotum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14349..15311)
|
nucleoside hydrolase n=1 Tax=Rhizobium radiobacter RepID=UPI000362279D
Nucleoside hydrolase {ECO:0000313|EMBL:KJF65167.1}; TaxID=1368418 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium nepotum 39/7.;"
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SCNpilot_expt_1000_bf_scaffold_1898_curated_19
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15413..15832)
|
precorrin-3B C(17)-methyltransferase (EC:2.1.1.131); K02189 cobalt-precorrin 5A hydrolase [EC:3.7.1.12]
precorrin methylase n=1 Tax=Rhizobium leguminosarum RepID=UPI00036E5BD6
Precorrin-3B C17-methyltransferase {ECO:0000313|EMBL:EKF57188.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;"
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SCNpilot_expt_1000_bf_scaffold_1898_curated_20
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15961..16746
|
membrane protein n=1 Tax=Rhizobium giardinii RepID=UPI0003702863
Uncharacterized protein {ECO:0000313|EMBL:EHS51909.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
hypothetical protein
|
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SCNpilot_expt_1000_bf_scaffold_1898_curated_21
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16743..17168)
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Uncharacterized protein n=1 Tax=Sinorhizobium medicae (strain WSM419) RepID=A6UAB2_SINMW
hypothetical protein; K08978 putative membrane protein
Uncharacterized protein {ECO:0000313|EMBL:ABR60592.1}; Flags: Precursor;; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;"
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SCNpilot_expt_1000_bf_scaffold_1898_curated_22
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17168..17743)
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Cob(I)yrinic acid a,c-diamide adenosyltransferase {ECO:0000313|EMBL:CDM57778.1}; EC=2.5.1.17 {ECO:0000313|EMBL:CDM57778.1};; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;"
Cob(I)alamin adenosyltransferase n=1 Tax=Rhizobium sp. CF142 RepID=J1TFL5_9RHIZ
cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase
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SCNpilot_expt_1000_bf_scaffold_1898_curated_23
Burkholderia ambifaria, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17988..21182
|
DNA-binding response regulator, LuxR family n=1 Tax=Burkholderia ambifaria MEX-5 RepID=B1TDG2_9BURK
DNA-binding response regulator, LuxR family {ECO:0000313|EMBL:EDT38400.1}; TaxID=396597 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia ambifaria MEX-5.;"
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SCNpilot_expt_1000_bf_scaffold_1898_curated_24
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21574..22617)
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CobW n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI0003688F10
cobW; cobalamin biosynthesis protein CobW; K02234 cobalamin biosynthesis protein CobW
Cobalamin biosynthesis protein CobW {ECO:0000313|EMBL:ACM26905.1}; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter (strain K84 / ATCC BAA-868).;"
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SCNpilot_expt_1000_bf_scaffold_1898_curated_25
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22622..23119)
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cobU; adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase; K02231 adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase n=1 Tax=Rhizobium sp. CF080 RepID=J3CF96_9RHIZ
Cobalamin biosynthesis protein {ECO:0000313|EMBL:KGE00670.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
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SCNpilot_expt_1000_bf_scaffold_1898_curated_26
unknown
|
Not on your lists |
comp(23065..23610)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_1898_curated_27
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23803..25200)
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cobQ; protein CobQ; K02232 adenosylcobyric acid synthase [EC:6.3.5.10]
Cobyric acid synthase n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9A7M0_RHIFH
Cobyric acid synthase {ECO:0000256|HAMAP-Rule:MF_00028, ECO:0000256|SAAS:SAAS00231811}; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;"
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SCNpilot_expt_1000_bf_scaffold_1898_curated_28
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25481..25624
|
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LN59_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB71510.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
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SCNpilot_expt_1000_bf_scaffold_1898_curated_29
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26403..27398
|
Glycine/betaine ABC transporter substrate-binding protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EEU2_9RHIZ
ABC-type glycine betaine transport, periplasmic subunit {ECO:0000313|EMBL:EHS49780.1}; Flags: Precursor;; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
QAT familiy ABC transporter, periplasmic substrate-binding protein
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SCNpilot_expt_1000_bf_scaffold_1898_curated_30
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27632..28543
|
ABC-type proline/glycine betaine transport system, permease component n=1 Tax=Rhizobium sp. AP16 RepID=J2WHG5_9RHIZ
ABC-type proline/glycine betaine transport system, permease component {ECO:0000313|EMBL:EJK82120.1}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
QAT familiy ABC transporter, permease protein
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