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SCNpilot_expt_1000_bf_scaffold_1898_curated_29

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 26403..27398

Top 3 Functional Annotations

Value Algorithm Source
Glycine/betaine ABC transporter substrate-binding protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EEU2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 84.6
  • Coverage: 332.0
  • Bit_score: 598
  • Evalue 3.50e-168
ABC-type glycine betaine transport, periplasmic subunit {ECO:0000313|EMBL:EHS49780.1}; Flags: Precursor;; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.3
  • Coverage: 332.0
  • Bit_score: 597
  • Evalue 1.10e-167
QAT familiy ABC transporter, periplasmic substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 82.2
  • Coverage: 332.0
  • Bit_score: 585
  • Evalue 9.60e-165

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Taxonomy

Rhizobium sp. PDO1-076 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 996
ATGAAGAAGCTGATCGCTTCAACTTTCCTCGCCGGTGGTCTGTTCGCGCTCGCCGGCACGGCTCATGCCGATTGCGGCGACGTCTCGATCGCGGAAATGAACTGGGCCTCCGCCGGCGTGGCAGCCCATGTGGACAAGATGATCCTGGAGAACGGCTACGGCTGCAAGGTGACGCTGGTCGCCGGCGACACCATGCCGACCTTCACCTCGATGAACGAGAAGTCCGAACCGGACATGGCCCCGGAATTCTGGGTCAACTCGGTGCGGACCGCGCTCGATGCGGCGATTGCCGAAGGCCGCATCATCCAGGCTGCGCCGCTGCTCAGCGACGGCGGCGTCGAAGGCTGGTGGATTCCGAAATTCCTCGCAGACGCCCATCCGGATATCAAGACGGTGCAGGATGCTCTGAAGCATCCGGAGCTCTTCCCGGCGCCGGAAGACCCGTCCAAGGCCGCCGTCATCAACTGCCCGTCCGGCTGGAACTGCCAGGTGTCGACCGCCAACCTCTACAAGGCGCTCAACGCCGAGAAGGACGGCTTCCAGCTCGTCGACAGCGGTTCGGCCGCCGGCCTCGACGGCTCGATCGCCAACGCCTTCGAGAAGAAGACCGGTTGGCTCGGCTACTACTGGGCGCCGACCGCCATCCTCGGCAAATATGAGATGACCAAGCTTAGCTTCGGCGTCGAGCACGACAAGAAGGAATGGGATGCCTGCACGGCGGTTCCCGATTGCGCCAATCCGAAGGTCAACGCCTACCCGACCTCCGACGTCTACACCATCGTGACCAAGCAGTTCTCCGAAAAGGCGGGCGTAGCGATGGATTACGTCAAGACGCGCAAGTGGGACAACCAGACGGTCGGCAAGGTTCTCGCCTGGATGACCGACAACCAGGGCACGAACGAGGACGCCGCCAAGTATTTCCTGCAGACCTATCCCGACATGTGGACCAAGTGGGTCGCGCCGGATGTCGCCGAAAAGGTGAAGGCAGCCCTCTGA
PROTEIN sequence
Length: 332
MKKLIASTFLAGGLFALAGTAHADCGDVSIAEMNWASAGVAAHVDKMILENGYGCKVTLVAGDTMPTFTSMNEKSEPDMAPEFWVNSVRTALDAAIAEGRIIQAAPLLSDGGVEGWWIPKFLADAHPDIKTVQDALKHPELFPAPEDPSKAAVINCPSGWNCQVSTANLYKALNAEKDGFQLVDSGSAAGLDGSIANAFEKKTGWLGYYWAPTAILGKYEMTKLSFGVEHDKKEWDACTAVPDCANPKVNAYPTSDVYTIVTKQFSEKAGVAMDYVKTRKWDNQTVGKVLAWMTDNQGTNEDAAKYFLQTYPDMWTKWVAPDVAEKVKAAL*