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SCNpilot_expt_1000_bf_scaffold_1898_curated_30

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 27632..28543

Top 3 Functional Annotations

Value Algorithm Source
ABC-type proline/glycine betaine transport system, permease component n=1 Tax=Rhizobium sp. AP16 RepID=J2WHG5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 83.5
  • Coverage: 303.0
  • Bit_score: 497
  • Evalue 1.30e-137
ABC-type proline/glycine betaine transport system, permease component {ECO:0000313|EMBL:EJK82120.1}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.5
  • Coverage: 303.0
  • Bit_score: 497
  • Evalue 1.80e-137
QAT familiy ABC transporter, permease protein similarity KEGG
DB: KEGG
  • Identity: 83.2
  • Coverage: 303.0
  • Bit_score: 494
  • Evalue 2.70e-137

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Taxonomy

Rhizobium sp. AP16 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 912
ATGGCAATACAATGCACCATACTGCCCGACCTTCTCTGTAATTTTCCGGCCATCGGCGACACGTCGATCCGTGCGGCCCGCAAGACGATCGATGACGGCTTCCGCAATCTGGTTCGCGCCAACAGCGACCTCATCTCCGTCGTCGTGCGTCCATTGCAACTGTTCCTGAATTTTCTGGAAGACCTCTTCGTCTCCACTCCGTGGATCGTGGTCCTGCTGATCATGATGGCGATCGTCTATGCCGCCAGCCGCAATATCCGCATCACCCTCGGCACCGCGGTGTCGATGATGCTGATCGGCGCGGTCGGCCTGTGGAACGACACGATGGTGACGCTGGCGATCGTCACGGTCGCGACCCTGATCGCCATCCTGGTCGGCCTGCCGATCGGCATTCTCATGGCGCGCTCCGACCGGCTGCAAAGCATCGTCAACCCGATCCTCGACGTGATGCAGACCATGCCGAGCTTCGACTACCTCATTCCGGTCGTCGTCATCTTCGGTATCGGCAAGGTGCCGGGCCTGATCGCCGTCGTCATCTATGCCGTCCCGCCGATGATTCGCCTGACAAATCTCGGCATAAGGCTCGTCGACAAGGAAGTTCTGGAGGCGGCCGACGCCTTCGGCTCGTCCAGCCGCCAAAAGCTGCGCAACGTGCAGATACCCCTGGCGCTGCCGACGATCATGGCCGGCATCAATCAGACGATCATGATGTCGCTCGCCATGGTGGTCGTCGCCTCGATGGTCGGCGTCGGCGGCCTCGGCAAGAACGTCCTGCAGGCCATCAACAATCAGTTCTTCACGATCGGGTTCCTGAACGGCTTTGCGCTCGTCGTCATCGCCATCATCTTCGATCGCACCAGCCAGGCTTTCGGCCGGCGCCTGCAAAAACACTCGGAGGTCATTCATGGCTAG
PROTEIN sequence
Length: 304
MAIQCTILPDLLCNFPAIGDTSIRAARKTIDDGFRNLVRANSDLISVVVRPLQLFLNFLEDLFVSTPWIVVLLIMMAIVYAASRNIRITLGTAVSMMLIGAVGLWNDTMVTLAIVTVATLIAILVGLPIGILMARSDRLQSIVNPILDVMQTMPSFDYLIPVVVIFGIGKVPGLIAVVIYAVPPMIRLTNLGIRLVDKEVLEAADAFGSSSRQKLRNVQIPLALPTIMAGINQTIMMSLAMVVVASMVGVGGLGKNVLQAINNQFFTIGFLNGFALVVIAIIFDRTSQAFGRRLQKHSEVIHG*