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SCNpilot_expt_1000_bf_scaffold_1143_curated_10

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 7964..9832

Top 3 Functional Annotations

Value Algorithm Source
chemotaxis protein n=1 Tax=Rhizobium giardinii RepID=UPI00037CA9F2 similarity UNIREF
DB: UNIREF100
  • Identity: 50.6
  • Coverage: 609.0
  • Bit_score: 574
  • Evalue 1.30e-160
mcpV; chemoreceptor methyl-accepting chemotaxis transmembrane protein; K03406 methyl-accepting chemotaxis protein similarity KEGG
DB: KEGG
  • Identity: 50.4
  • Coverage: 607.0
  • Bit_score: 567
  • Evalue 5.10e-159
Probable chemoreceptor (Methyl-accepting chemotaxis) transmembrane protein {ECO:0000313|EMBL:CAC46476.1}; TaxID=266834 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium; meliloti).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.4
  • Coverage: 607.0
  • Bit_score: 567
  • Evalue 2.30e-158

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Taxonomy

Sinorhizobium meliloti → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1869
ATGTTCCGCCTACGCATTTCGACCAAACTCTATTTGCTCATTCTTCTGTCTCTTGCGGTTCTCACGGCTTCCATGGCCGTCAGCCTGCTGTCCAGCAGCCGCCAGCTCAACGACGAACGAAAGGCCCTTCTCCAGACCGTCGACGACGTGGCGCTGACGATCGTCGCGCAGAAATATGCCCTGCTGCAATCCGGCGCCTTGTCGGAAGAGCAAGCCAAGGCGGCCGCGCTCGAGGAATTGGCGGCCATTCGCTACGGCGAAAACGGTTATGTCTGGGTCAACGATCTCAACAGTGTCGTGCTGATGCATCCGCTGAAGCCGGAACTTGACGGCAAGGATGCAAGCGGCATCAAGGATCCGAACGGCAAGGCCCTGTTCGTGGAGTTTTCCCGCGTTGCCAAGGCGGAAAAGAGCGGTTTCGTCGATTACATGTGGCCGAAGCCAGGTGTCGAGGAGCCTGTGGCGAAGCTGTCGCATGTCGTGCTGTTCGAACCTTGGGGCTGGGTGGTCGGCAACGGCGTCTATATCGACGATCTCGCGGAAAAATTCTGGTCGAGCGCATATCTGGTGCTGGCCGTCGGCGGGTTTGGCACCGTGTTCATGGTGGGGGCGGCGCTGTCGATCATCCGCTCCGTCGTCGGGCCGATCGGTCGGCTGCGTCGGGCGATGGGCCTTATCGCGGAAGAAGATTTTTCGGCCGAGGTTCCGGATGTCGGCCGCGCCGACGAAGTGGGCGAAATGGCACGCACATTGGATGCGTTGCGCAATTCGGTCAATGACCGTGTGCAGATGCGGCTTGCCCATGCCGAAGCCCAGAGCCGGCTTCTGGATGCGGAAAAGGCTGAGGCCGAGCGCCTGCGCGCCGCTCATTCCGATAACCTGCAGACCGTGATCACCGAACTGGGCGCTGGCCTCGCCCGGCTTGCGGAATGCAATATCCGCATGACTATCGACCAGCCTTTCCCCGGCGACTTCGAGCCGCTGCGCCTGGACTTCAACACCTCCATCGCCGCCTTCCAGGCAACGCTGGTCGAGGTTCTGCACCAGACACAGGCGCTGCAGGCCAATGGCGACGAAATGCGCGAAGCTTCCGACAATCTCGCCCGGCGCACCGAACAGCAGGCGGCCGCCCTGGAGCAGACGTCCGCGGCGCTGGTCGAAGTGGCGGCCACCGTCAATTCCTCGGCCGAGCGCACCCAGCAGACGCGCCAGCTCGTGCGGGAAGCGCGAAGCTGCGCCCAGTCTTCCGGCGATGTCGTGCGTGATGCGGTCAAGGCGATGCATCGCATCGAAAGCGCCTCCAACGAGATCAACCAGATCATCGTCGTTATCGATGCCATCGCCTTCCAGACCAATCTGCTGGCCTTGAATGCCGGCGTCGAGGCCGCGCGTGCAGGTGAGGCGGGCAAGGGCTTCGCCGTCGTGGCGCAGGAAGTGCGTGAACTGGCGCAACGCTCCGCCAAGGCGGCCAAGGAGATCAAGGAGCTGATTGTCAATTCCGCCTCGCAGGTCTCGGCCGGTGTGCAACTCGTCAGCGACACCGGCAAGGCGCTGGAACAGATCGGTGATTACGTCTCTGCCATCGATGAGAATGTCGATGCCATCGCCACCGCCGCCTCCGAGCAATCGGCAGGCCTGCAGCAGATCAGCGCTGCCGTCAACAGCATCGACGAGATGACCCAGAAGAATGCTGCCATGGTCGAGGAAACCACTGCCATCAGCCATACGCTGGCGGAGGAGGCGAGTGTTCTGGATAGCCTCGTCAAGCGCTTCAAGCTCAACCGGCGCAATGCGATCCGCGAGCCGGGCTCCGCCGCTGCCGAGGCTGGAAACCGGCGCCACGGCGCTCCGCGGGTTCGTGCCGCCTGA
PROTEIN sequence
Length: 623
MFRLRISTKLYLLILLSLAVLTASMAVSLLSSSRQLNDERKALLQTVDDVALTIVAQKYALLQSGALSEEQAKAAALEELAAIRYGENGYVWVNDLNSVVLMHPLKPELDGKDASGIKDPNGKALFVEFSRVAKAEKSGFVDYMWPKPGVEEPVAKLSHVVLFEPWGWVVGNGVYIDDLAEKFWSSAYLVLAVGGFGTVFMVGAALSIIRSVVGPIGRLRRAMGLIAEEDFSAEVPDVGRADEVGEMARTLDALRNSVNDRVQMRLAHAEAQSRLLDAEKAEAERLRAAHSDNLQTVITELGAGLARLAECNIRMTIDQPFPGDFEPLRLDFNTSIAAFQATLVEVLHQTQALQANGDEMREASDNLARRTEQQAAALEQTSAALVEVAATVNSSAERTQQTRQLVREARSCAQSSGDVVRDAVKAMHRIESASNEINQIIVVIDAIAFQTNLLALNAGVEAARAGEAGKGFAVVAQEVRELAQRSAKAAKEIKELIVNSASQVSAGVQLVSDTGKALEQIGDYVSAIDENVDAIATAASEQSAGLQQISAAVNSIDEMTQKNAAMVEETTAISHTLAEEASVLDSLVKRFKLNRRNAIREPGSAAAEAGNRRHGAPRVRAA*