name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_1143_curated_1
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2..904)
|
dadX; Alanine racemase, catabolic (EC:5.1.1.1)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|SAAS:SAAS00021659}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|SAAS:SAAS00021659};; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
Alanine racemase n=1 Tax=Sinorhizobium meliloti Rm41 RepID=K0P3N0_RHIML
|
|
SCNpilot_expt_1000_bf_scaffold_1143_curated_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1029..1493
|
Putative HTH-type transcriptional regulator y4sM n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CX25_9RHIZ
Putative HTH-type transcriptional regulator y4sM {ECO:0000313|EMBL:EYR82556.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
putative HTH-type transcriptional regulator y4sM
|
|
SCNpilot_expt_1000_bf_scaffold_1143_curated_3
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1545..2879)
|
beta alanine--pyruvate transaminase; K00822 beta-alanine--pyruvate transaminase [EC:2.6.1.18]
Aminotransferase class-III n=2 Tax=Rhizobium leguminosarum bv. trifolii RepID=B6A0D8_RHILW
Aminotransferase class-III {ECO:0000313|EMBL:ACI58072.1}; TaxID=395492 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM2304).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1143_curated_4
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3030..3578
|
HTH-type transcriptional regulator PuuR n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3XEL1_RHIFR
puuR; HTH-type transcriptional regulator PuuR
HTH-type transcriptional regulator PuuR {ECO:0000313|EMBL:AFL54317.1}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1143_curated_5
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3704..4195
|
MutT/NUDIX family NTP pyrophosphohydrolase {ECO:0000313|EMBL:CCE98261.1}; EC=3.6.1.22 {ECO:0000313|EMBL:CCE98261.1};; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;"
MutT/NUDIX family NTP pyrophosphohydrolase n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9A5E0_RHIFH
MutT/NUDIX family NTP pyrophosphohydrolase
|
|
SCNpilot_expt_1000_bf_scaffold_1143_curated_6
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4507..5262
|
Probable septum site-determining protein MinC n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LYE2_RHITR
minC; septum site-determining protein MinC
Probable septum site-determining protein MinC {ECO:0000256|HAMAP-Rule:MF_00267}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1143_curated_7
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5296..6111
|
Site-determining protein n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X2E6_RHIFR
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
minD; septum site-determining protein MinD
|
|
SCNpilot_expt_1000_bf_scaffold_1143_curated_8
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6108..6368
|
Cell division topological specificity factor n=1 Tax=Rhizobium sp. CF080 RepID=J2J8I2_9RHIZ
Cell division topological specificity factor {ECO:0000256|HAMAP-Rule:MF_00262, ECO:0000256|SAAS:SAAS00085645}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
cell division topological specificity factor; K03608 cell division topological specificity factor
|
|
SCNpilot_expt_1000_bf_scaffold_1143_curated_9
Mesorhizobium sp. LNHC220B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6616..7680
|
Fructose-bisphosphate aldolase {ECO:0000313|EMBL:ESY86703.1}; EC=4.1.2.13 {ECO:0000313|EMBL:ESY86703.1};; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC220B00.;"
UPI0003CE840F related cluster n=1 Tax=unknown RepID=UPI0003CE840F
fructose-bisphosphate aldolase, class II, Calvin cycle subtype
|
|
SCNpilot_expt_1000_bf_scaffold_1143_curated_10
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7964..9832
|
chemotaxis protein n=1 Tax=Rhizobium giardinii RepID=UPI00037CA9F2
mcpV; chemoreceptor methyl-accepting chemotaxis transmembrane protein; K03406 methyl-accepting chemotaxis protein
Probable chemoreceptor (Methyl-accepting chemotaxis) transmembrane protein {ECO:0000313|EMBL:CAC46476.1}; TaxID=266834 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium; meliloti).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1143_curated_11
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9911..11101)
|
Putative oxidoreductase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LP38_RHITR
putative oxidoreductase
Putative oxidoreductase {ECO:0000313|EMBL:AGB72481.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1143_curated_12
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11129..12181)
|
Uncharacterized protein n=1 Tax=Rhizobium sp. RepID=L0NI28_RHISP
Uncharacterized protein {ECO:0000313|EMBL:CCF20539.1}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1143_curated_13
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12324..13271)
|
Putative sugar ABC transporter, substrate-binding protein n=1 Tax=Rhizobium etli CNPAF512 RepID=F2AFP9_RHIET
Putative sugar ABC transporter, substrate-binding protein {ECO:0000313|EMBL:EGE56711.1}; TaxID=993047 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli CNPAF512.;"
sugar ABC transporter substrate-binding protein; K10439 ribose transport system substrate-binding protein
|
|
SCNpilot_expt_1000_bf_scaffold_1143_curated_14
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13347..13670)
|
Putative sugar ABC transporter, permease protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V0R2_9RHIZ
sugar ABC transporter permease; K10440 ribose transport system permease protein
Permease component of ribose/xylose/arabinose/galactoside ABC-type transporter {ECO:0000313|EMBL:EJL48550.1}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1143_curated_15
unknown
|
Not on your lists |
13943..14536
|
Uncharacterized protein n=1 Tax=Brucella melitensis NI RepID=G4PHB4_BRUML
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1143_curated_16
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14409..15881)
|
ABC transporter; K10441 ribose transport system ATP-binding protein [EC:3.6.3.17]
ABC transporter related n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM1325) RepID=C6AWQ3_RHILS
ABC transporter related {ECO:0000313|EMBL:ACS57950.1}; TaxID=395491 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM1325).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1143_curated_17
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16038..17084
|
LacI family transcriptional regulator n=1 Tax=Rhizobium sp. Pop5 RepID=K0VGT8_9RHIZ
LacI family transcriptional repressor CytR {ECO:0000313|EMBL:AIC29035.1}; TaxID=1432050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. IE4771.;"
cytR; LacI family transcriptional repressor CytR
|
|
SCNpilot_expt_1000_bf_scaffold_1143_curated_18
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17116..18426)
|
Xylose isomerase {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609}; EC=5.3.1.5 {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609};; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
Xylose isomerase n=1 Tax=Rhizobium sp. RepID=L0NHI6_RHISP
|
|
SCNpilot_expt_1000_bf_scaffold_1143_curated_19
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18710..20164)
|
D-xylulose kinase n=1 Tax=Rhizobium sp. CF142 RepID=J2L6N4_9RHIZ
D-xylulose kinase {ECO:0000313|EMBL:EJJ29167.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1143_curated_20
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20193..21215)
|
ABC-type sugar transport system, periplasmic component n=1 Tax=Rhizobium sp. CF142 RepID=J1SV93_9RHIZ
LacI family transcriptional regulator protein {ECO:0000313|EMBL:AJD42871.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator
|
|
SCNpilot_expt_1000_bf_scaffold_1143_curated_21
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21392..22144
|
Transcriptional regulator n=1 Tax=Phyllobacterium sp. YR531 RepID=J2VJB4_9RHIZ
GntR family transcriptional regulator {ECO:0000313|EMBL:KKB08300.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
GntR family transcriptional regulator
|
|
SCNpilot_expt_1000_bf_scaffold_1143_curated_22
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22261..23001
|
sugar ABC transporter ATP-binding protein; K02056 simple sugar transport system ATP-binding protein [EC:3.6.3.17]
rbh
Sugar ABC transporter ATP-binding protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89VC6_BRADU
Sugar (Ribose) ABC transporter ATP-binding protein {ECO:0000313|EMBL:KFC64558.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1143_curated_23
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22998..24026
|
Permease component of ribose/xylose/arabinose/galactoside ABC-type transporter n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YBS4_9BRAD
Sugar ABC transporter permease {ECO:0000313|EMBL:KKB10791.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
sugar ABC transporter permease; K10440 ribose transport system permease protein
|
|
SCNpilot_expt_1000_bf_scaffold_1143_curated_24
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24116..25060
|
ABC-type sugar transport system, periplasmic component n=1 Tax=Microvirga sp. WSM3557 RepID=I4YUF7_9RHIZ
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:KKB10790.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
ribose ABC transporter substrate-binding protein; K02058 simple sugar transport system substrate-binding protein
|
|
SCNpilot_expt_1000_bf_scaffold_1143_curated_25
Chromobacterium violaceum, Chromobacterium, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25117..25869)
|
Putative short-chain dehydrogenase/reductase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z6Z7_AZOL4
Short-chain dehydrogenase {ECO:0000313|EMBL:KJH67982.1}; TaxID=536 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Chromobacterium.;" source="Chromobacterium violaceum.;"
putative short-chain dehydrogenase/reductase
|
|
SCNpilot_expt_1000_bf_scaffold_1143_curated_26
Ochrobactrum sp. CDB2, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26121..27512
|
Multi anti extrusion protein MatE n=1 Tax=Ochrobactrum sp. CDB2 RepID=M3I4T9_9RHIZ
Multi anti extrusion protein MatE {ECO:0000313|EMBL:EMG54962.1}; TaxID=360313 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. CDB2.;"
multi antimicrobial extrusion protein MatE
|
|
SCNpilot_expt_1000_bf_scaffold_1143_curated_27
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27509..27934
|
hypothetical protein n=1 Tax=Rhizobium mongolense RepID=UPI0003B6C5AF
Uncharacterized protein {ECO:0000313|EMBL:EJJ27147.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1143_curated_28
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27971..28180)
|
hypothetical protein n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI00035DDDDA
Putative conserved protein {ECO:0000313|EMBL:CDM55765.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1143_curated_29
unknown
|
Not on your lists |
28350..28874
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_1143_curated_30
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29704..30954)
|
D-amino acid dehydrogenase (EC:1.4.99.1)
D-amino acid dehydrogenase n=1 Tax=Sinorhizobium meliloti Rm41 RepID=K0PAQ7_RHIML
D-amino-acid dehydrogenase, FAD dependent {ECO:0000313|EMBL:AHK46231.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
|