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SCNpilot_expt_1000_bf_scaffold_1143_curated_18

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(17116..18426)

Top 3 Functional Annotations

Value Algorithm Source
Xylose isomerase {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609}; EC=5.3.1.5 {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609};; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.0
  • Coverage: 436.0
  • Bit_score: 826
  • Evalue 1.50e-236
Xylose isomerase (EC:5.3.1.5); K01805 xylose isomerase [EC:5.3.1.5] similarity KEGG
DB: KEGG
  • Identity: 88.5
  • Coverage: 436.0
  • Bit_score: 817
  • Evalue 2.00e-234
Xylose isomerase n=1 Tax=Rhizobium sp. RepID=L0NHI6_RHISP similarity UNIREF
DB: UNIREF100
  • Identity: 89.0
  • Coverage: 436.0
  • Bit_score: 826
  • Evalue 1.00e-236

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Taxonomy

Rhizobium sp. → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1311
ATGAGCACAGGCTTTTTCGGCGATATCGCCAAGATCAAATATGAAGGACCGGACAGCGACAATCCTCTCGCCTTCCGCCACTATCAGCCCGACGAAATCGTGCTCGGCAAGCGCATGGAGGATCACCTGCGCTTCGCCGTCGCCTATTGGCATACGTTTACCTGGCCGGGCGGCGATCCCTTCGGCGGCCAGACCTTCCTCCGTCCCTGGTTTCAGGATGGCATGCAGGCGGCCAAGCTCAAGGCCGATGTCGCCTTCGAATTCTTCTCGCTGCTTGGCGCGCCCTTCTATTGCTTCCACGACGCCGACGTTCGCCCCGAAGGCAACAGCTTTGCCGAAAGCACCCGCAACCTGAACGACATCGTCGATTATTTCGCCGAAAAGCAGGCCGCGACCGGCGTGAAACTGCTCTGGGGCACGGCGAACCTGTTCTCGCATCGCCGCTTCATGGCGGGCGCTGCCACCAACCCGGACCCGGATGTCTTCGCCTACTCGGCCGCGACCGTCAAAACATGCCTCGACGCCACCCAAAAGCTCGGCGGCGAGAATTACGTGCTATGGGGCGGGCGCGAGGGTTACGAGACGCTGCTCAACACCGACCTGAAACGCGAGCTCGACCAGATGGGCCGCTTCCTCAACCTGGTGGTCGAATACAAGTACAAGATCGGTTACAAGGGCACGATCCTGATCGAGCCCAAGCCGCAGGAGCCGACCAAGCACCAGTACGACTACGACGTCGCCACCGTCTATGCCTTCCTCAAGAATCATGGGCTGGAAAACGAGGTAAAGCTCAACATCGAGCAGGGCCACGCCATCCTCGCCGGCCATACTTTCGAGCACGAACTGGCGCTCGCCAATGCGCTCGGCATCTTCGGCTCCATCGACATGAACCGCAATGACTACCAGTCCGGCTGGGACACCGACCAGTTCCCCAACAATGTACCGGAAATGGCGCTGGCCTATTACCAGGTGCTGCTTGCCGGCGGCTTCACCACCGGCGGGACGAACTTCGACGCCAAGCTGCGCCGCCAGTCGCTCGATCCGCAGGATCTGCTGATTGGCCATATTGGCGGCATGGACTGCTGCGCGCGCGGCCTGAAGGCCGCCGCCCGCATGCTGGAAGACGGAGCATTGTCGAAACCGCTGGAGGCACGTTATGCCGGCTGGGACTCTCCCGAAGCACAAAAGATGCTGCGCGGCGAATACAAGCTGGACGAGATCGCCGCTGCCGTCGAGCGCGACAACATCAATCCCGAACCGCGCTCGGGCCGCCAGGAACTTTTGGAAAACATCGTCAACCGCTACGTCTGA
PROTEIN sequence
Length: 437
MSTGFFGDIAKIKYEGPDSDNPLAFRHYQPDEIVLGKRMEDHLRFAVAYWHTFTWPGGDPFGGQTFLRPWFQDGMQAAKLKADVAFEFFSLLGAPFYCFHDADVRPEGNSFAESTRNLNDIVDYFAEKQAATGVKLLWGTANLFSHRRFMAGAATNPDPDVFAYSAATVKTCLDATQKLGGENYVLWGGREGYETLLNTDLKRELDQMGRFLNLVVEYKYKIGYKGTILIEPKPQEPTKHQYDYDVATVYAFLKNHGLENEVKLNIEQGHAILAGHTFEHELALANALGIFGSIDMNRNDYQSGWDTDQFPNNVPEMALAYYQVLLAGGFTTGGTNFDAKLRRQSLDPQDLLIGHIGGMDCCARGLKAAARMLEDGALSKPLEARYAGWDSPEAQKMLRGEYKLDEIAAAVERDNINPEPRSGRQELLENIVNRYV*