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SCNpilot_expt_1000_bf_scaffold_1143_curated_20

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(20193..21215)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type sugar transport system, periplasmic component n=1 Tax=Rhizobium sp. CF142 RepID=J1SV93_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 70.4
  • Coverage: 341.0
  • Bit_score: 460
  • Evalue 1.20e-126
LacI family transcriptional regulator protein {ECO:0000313|EMBL:AJD42871.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.8
  • Coverage: 341.0
  • Bit_score: 463
  • Evalue 1.90e-127
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 69.5
  • Coverage: 341.0
  • Bit_score: 451
  • Evalue 2.20e-124

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Taxonomy

Rhizobium gallicum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1023
ATGCGGCCGACCGTTCACGATATCGCCGATCACGCGGGCGTCAGCCTCGCCACCGTCGACCGGGTTTTGAACCGGCGGCCTGGGGTGCGGGCCGCGACGCGGGCGCGTGTCGAGGCGGCCATCGAGACGCTGGGTTATGTCCGCGACGTCGCCGCCGCCAATCTCGCCAAGGGCCGGGTCTATCCCTTCACCTTCATCCTGCCCTCCAGCGACAATTCCTTCATGCACGGTCTGCATGACGAACTGCGCCATGCCATGGCCCGCAGCGCCAGCGAACGCACCAATATCCGCATCGTCGAAGTGCCCGCTTTCGAGCCTACCGCGCTGATTGCGACGCTTGCCGAAGCGCGGGACACGCAACCGGCCAGCATCGCGCTGGTCGCGGTGGAGGACGAGGGCGTGCGCGCGGCGATCGATGCCATCGCCGCCGAGGGCATTCCGGTGGTGACGCTGGTTTCGGACCTGCCGGGCTCACGCCGCGCCCATTATGCCGGCGTCGACAACATCGCCGCGGGGCGCACCGCCGGCGGGCTGATCGGCCGCTTCCTGCGCGGCCGCGCTGGAAAAATCGGCGTACTCGCCGGCTCGATGCTGGTGCGCGACCATCGCGAGCGGCTCGACGGTTTTTCGGCTGTTCTTACCGCCGATTATCCCGGTCTCGCCATCCTGCCAGTGCGCGAGGGGCGCGACGACCCGGAGGTGGCGCGCGCCGCCGTCGCCGGCTTGATGGCAGAGCATCCTGGCCTGCTCGGAATCTACAGCCTGGGCGCCGGCAATCGCGGGCTGATCGCGGCGCTGAAGGCGCGGCCGGATATCAGGCCGGTGGTGATCGCCCACGAACTGACCGCCTTTACCCGCGCCGCGCTGAGCGAGGGCCTGATCGACGCCGTGCTCAACCAGGATGCCGGCCATGAAATCCGCAGCGCCATCCGCGTGCTGAAGGCAAAGGCGGACGGCGTGCCGGTCATCGCCGCGCAGGAGCGTATCCGCATCGACATATTCCTGAAGGACAACCTGCCGTGA
PROTEIN sequence
Length: 341
MRPTVHDIADHAGVSLATVDRVLNRRPGVRAATRARVEAAIETLGYVRDVAAANLAKGRVYPFTFILPSSDNSFMHGLHDELRHAMARSASERTNIRIVEVPAFEPTALIATLAEARDTQPASIALVAVEDEGVRAAIDAIAAEGIPVVTLVSDLPGSRRAHYAGVDNIAAGRTAGGLIGRFLRGRAGKIGVLAGSMLVRDHRERLDGFSAVLTADYPGLAILPVREGRDDPEVARAAVAGLMAEHPGLLGIYSLGAGNRGLIAALKARPDIRPVVIAHELTAFTRAALSEGLIDAVLNQDAGHEIRSAIRVLKAKADGVPVIAAQERIRIDIFLKDNLP*