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SCNpilot_expt_1000_bf_scaffold_1143_curated_14

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(13347..13670)

Top 3 Functional Annotations

Value Algorithm Source
Putative sugar ABC transporter, permease protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V0R2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 97.2
  • Coverage: 107.0
  • Bit_score: 200
  • Evalue 6.90e-49
sugar ABC transporter permease; K10440 ribose transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 97.2
  • Coverage: 107.0
  • Bit_score: 200
  • Evalue 2.20e-49
Permease component of ribose/xylose/arabinose/galactoside ABC-type transporter {ECO:0000313|EMBL:EJL48550.1}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.2
  • Coverage: 107.0
  • Bit_score: 200
  • Evalue 9.70e-49

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Taxonomy

Rhizobium sp. CF122 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 324
GTGCGCGCCATCGCCTTCGTCATCCAGGGCCTGTGCGTGGCGATTGCCGTGCTGCTCTACGTGCCGCGCCTCGGCTCGACCTCTGCAACGACCGGCATTCTCTGGGAATTGCAGGCGATCACTGCGGTCGTCGTCGGCGGCACGGCGCTGAAAGGCGGCGCGGGGCGCGTCTGGGGCACGATCTGCGGCGCCTTCATTCTCGAGCTCGTCGGCAACATCATGCTCTTGTCGAATTTCATCAGCGAATACCTGATCGGCGCGATCCAAGGCGCGATCATCATCATCGCCATGCTGGTGCAGCGCTCGCTGGTCCGTAAAGGCTAG
PROTEIN sequence
Length: 108
VRAIAFVIQGLCVAIAVLLYVPRLGSTSATTGILWELQAITAVVVGGTALKGGAGRVWGTICGAFILELVGNIMLLSNFISEYLIGAIQGAIIIIAMLVQRSLVRKG*