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SCNpilot_expt_1000_bf_scaffold_2412_curated_28

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(20686..22149)

Top 3 Functional Annotations

Value Algorithm Source
lactate dehydrogenase n=1 Tax=Rhizobium leguminosarum RepID=UPI000363B202 similarity UNIREF
DB: UNIREF100
  • Identity: 82.0
  • Coverage: 488.0
  • Bit_score: 794
  • Evalue 4.90e-227
Riorf93 protein {ECO:0000313|EMBL:BAB16212.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.3
  • Coverage: 487.0
  • Bit_score: 792
  • Evalue 2.60e-226
N-6 DNA methylase similarity KEGG
DB: KEGG
  • Identity: 81.6
  • Coverage: 488.0
  • Bit_score: 787
  • Evalue 3.20e-225

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Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1464
ATGTACCAGCAGATCCTCGACGGCCGCATCAAGGCAATCGAGATGCGCGAGGGACCGGCCCAGCCCGGCGACGACATCCTGCTTTCGGTCATCACGGATGGCCGCCATGCGGCGATCGACCTTCGCCTCGTCATGCCGGCCAACGATAACGAGCCGGACAACAAGCTCAATCTGCTCGTCCAGAATGCTTTCCGTATCTGGCAGGAGACGGCGGACCAAGTGTTCCTCCGGCCGGACGGCAAGCCTTACGATCTGTCGGGGGCCGCGCAGATGATTTTTTCCGATCTCGGCACCATCAACGTCGAGAAGACACGCGGTTTCTCCGCCTATCGCTGGATCCGCGATGAGTTGATCCGGCTCGGTGTTCCCGCCGGCGAGATCGCCTATATGCAGGACTACACGAAGTCGGAGGCCAAGCAGCGGCTGTTCGGAGACGTTCGTGCAGGCCGTGTCCGCTTCCTGATCGGCTCCTCCGAGACGATGGGCACCGGAGTCAACGCCCAACTCCGGCTGAAGGCGCTCCATCATCTCGACGTGCCATGGTTGCCGTCGCAGATCGAGCAGCGGGAGGGCCGCATCGTTCGTCAGGGCAACCAGCACGATGTCGTCGATATCTTCGCTTATGCGACCCAAGGATCGCTCGACGCGAGCATGTGGCAGAACAACGAGCGCAAGGCTCGTTTCATCGCGGCGGCACTTTCCGGCGATACCTCGATCCGACGCCTCGAAGATCTCGGCGAAGGCCAGGCCAACCAGTTCGCCATCGCTAAGGCAATTGCCTCCGGCGACGAGCGCCTGATGAAGAAGGCCGGACTGGAAGCCGATACCGCCCGTCTCGAGCGCCTGCGCGCCGCCCATGACGATGACCTGTTCTCCGTTCGCCGGCGGCTGCGAGAAGCAGAACGCGACATCGAGGTCGCGACGCGCCGGATCGACGAGATCGGCCAAGACATCGCCCGACTGGTGCCGACATCAGGCGAGGCGTTCATGATGACCGTGCTTGGTGAACAGTATAGTGAGCGCAAGGACGCCGGGCGCGCGGTGATGAAGGAGATCCTCACGCTCGTCCAGCTTCAGCAGGAAGGCGAAGCGTTGCTTGGGTCGATCGCCGGTTTCGACGTTGTCTACGAGGGCGAGCGTTTCGGAAAGGGCGGCTATCACTACCGCACCGTCCTGCAACGCACCGGCGCCGATTACGAGATTGACCTGCCGGTCACGGTGACGCCGCTCGGCGCAGTCTCCCGTCTCGAACATGCGCTCGGCGATTTCGAGGGCGAGCGGTATCGCCAGCGCCAGCATCTCGAAGACGCGAGGCGCCGGCTCGCTTCCTACCGCGCGCACGAGACCGGCACCTTTGCCTTCGCTGACGAACTCGCCGCGAAGCGTCGCGAACTGGAGGAGGTCGAGGAGGCATTGGCCGCGGAAGCCCGCGCCACCGACGAGCCGGTCGCGAAGGCAGCATGA
PROTEIN sequence
Length: 488
MYQQILDGRIKAIEMREGPAQPGDDILLSVITDGRHAAIDLRLVMPANDNEPDNKLNLLVQNAFRIWQETADQVFLRPDGKPYDLSGAAQMIFSDLGTINVEKTRGFSAYRWIRDELIRLGVPAGEIAYMQDYTKSEAKQRLFGDVRAGRVRFLIGSSETMGTGVNAQLRLKALHHLDVPWLPSQIEQREGRIVRQGNQHDVVDIFAYATQGSLDASMWQNNERKARFIAAALSGDTSIRRLEDLGEGQANQFAIAKAIASGDERLMKKAGLEADTARLERLRAAHDDDLFSVRRRLREAERDIEVATRRIDEIGQDIARLVPTSGEAFMMTVLGEQYSERKDAGRAVMKEILTLVQLQQEGEALLGSIAGFDVVYEGERFGKGGYHYRTVLQRTGADYEIDLPVTVTPLGAVSRLEHALGDFEGERYRQRQHLEDARRRLASYRAHETGTFAFADELAAKRRELEEVEEALAAEARATDEPVAKAA*