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SCNpilot_expt_1000_bf_scaffold_2412_curated

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2412_curated_1
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(754..1023)
DNA (270bp) protein (90aa)
Prevent-host-death family protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IQ94_XANP2
prevent-host-death family protein
Prevent-host-death family protein {ECO:0000313|EMBL:ABS70190.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCNpilot_expt_1000_bf_scaffold_2412_curated_2
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1114..1281)
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM597 RepID=I9N3R0_RHILT
Uncharacterized protein {ECO:0000313|EMBL:EJB01307.1}; TaxID=754764 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM597.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2412_curated_3
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1538..1846)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CZ24_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR80615.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2412_curated_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1979..2770)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CGN0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR79572.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2412_curated_5
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3108..3599)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM2304) RepID=B6A594_RHILW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACI59577.1}; TaxID=395492 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM2304).;"
SCNpilot_expt_1000_bf_scaffold_2412_curated_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3984..4424)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CC07_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR77650.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
SCNpilot_expt_1000_bf_scaffold_2412_curated_7
unknown

Not on your lists

comp(4605..4841)
DNA (237bp) protein (79aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2412_curated_8
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4921..5190
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. viciae (strain 3841) RepID=Q1M9Z5_RHIL3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAK11546.1}; TaxID=216596 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae (strain 3841).;"
SCNpilot_expt_1000_bf_scaffold_2412_curated_9
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5349..5660)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens CCNWGS0286 RepID=G6XZN3_RHIRD
Uncharacterized protein {ECO:0000313|EMBL:EHH03537.1}; TaxID=1082932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens CCNWGS0286.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2412_curated_10
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7040..7309)
DNA (270bp) protein (90aa)
Prevent-host-death family protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM597 RepID=I9N0A4_RHILT
Prevent-host-death family protein {ECO:0000313|EMBL:EJB01304.1}; TaxID=754764 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM597.;"
putative prevent-host-death protein
SCNpilot_expt_1000_bf_scaffold_2412_curated_11
Mesorhizobium sp. LSJC264A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7447..7752)
DNA (306bp) protein (102aa)
DNA damage-inducible protein n=2 Tax=Mesorhizobium sp. LSJC264A00 RepID=V7ESH9_9RHIZ
DNA damage-inducible protein {ECO:0000313|EMBL:ESX12679.1}; TaxID=1287321 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC264A00.;"
RelB/DinJ family addiction module antitoxin; K07473 DNA-damage-inducible protein J
SCNpilot_expt_1000_bf_scaffold_2412_curated_12
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7834..8391)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Methylobacterium extorquens (strain DSM 5838 / DM4) RepID=C7CN60_METED
Uncharacterized protein {ECO:0000313|EMBL:EYR81709.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2412_curated_13
Sinorhizobium phage phiLM21, Caudovirales, Viruses

Not on your lists

comp(8343..9176)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Cyanothece sp. (strain PCC 7822) RepID=E0UCC7_CYAP2
Uncharacterized protein {ECO:0000313|EMBL:AII27777.1}; TaxID=1524882 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae.;" source="Sinorhizobium phage phiLM21.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2412_curated_14
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9173..10306)
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=Ochrobactrum intermedium M86 RepID=M5JTS2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ELT47469.1}; TaxID=1234597 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium M86.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2412_curated_15
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10406..11395)
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Ochrobactrum intermedium M86 RepID=M5JLK0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ELT47483.1}; TaxID=1234597 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium M86.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2412_curated_16
Rhizobium sp. H41, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11395..12321)
DNA (927bp) protein (309aa)
ArdC antirestriction protein n=1 Tax=Rhizobium leguminosarum RepID=UPI000367A5DE
ArdC antirestriction protein {ECO:0000313|EMBL:KGE79861.1}; TaxID=1510041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. H41.;"
conjugal transfer antirestriction ArdC-like protein
SCNpilot_expt_1000_bf_scaffold_2412_curated_17
unknown

Not on your lists

12706..13245
DNA (540bp) protein (180aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2412_curated_18
Thioalkalivibrio sp. K90mix, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13265..13684
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Thioalkalivibrio sp. (strain K90mix) RepID=D3SGI4_THISK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADC73225.1}; TaxID=396595 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sp. (strain K90mix).;"
SCNpilot_expt_1000_bf_scaffold_2412_curated_19
unknown

Not on your lists

comp(13739..13984)
DNA (246bp) protein (82aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2412_curated_20
Agrobacterium rubi, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14152..14736)
DNA (585bp) protein (195aa)
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI00036C0875
Uncharacterized protein {ECO:0000313|EMBL:GAK72269.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2412_curated_21
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15247..15642)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FIW8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV16360.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2412_curated_22

Not on your lists

comp(15701..15943)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Natrialba aegyptia DSM 13077 RepID=M0ARW0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KKN04261.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SCNpilot_expt_1000_bf_scaffold_2412_curated_23
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16128..16445)
DNA (318bp) protein (106aa)
Hypothetical conserved protein n=1 Tax=Rhizobium etli (strain CFN 42 / ATCC 51251) RepID=Q2K2N0_RHIEC
Uncharacterized protein {ECO:0000313|EMBL:AIC30075.1}; TaxID=1432050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. IE4771.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2412_curated_24
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16575..17324)
DNA (750bp) protein (250aa)
Rcorf65 n=1 Tax=Agrobacterium rhizogenes RepID=A8W066_AGRRH
Rcorf65 {ECO:0000313|EMBL:ABW33622.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2412_curated_25
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17321..17770)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Rhizobium etli bv. mimosae str. Mim1 RepID=S5SCT1_RHIET
Uncharacterized protein {ECO:0000313|EMBL:AIC29692.1}; TaxID=1432050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. IE4771.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2412_curated_26
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17866..19620)
DNA (1755bp) protein (585aa)
ParB domain protein nuclease n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X7Y4_OCHA4
plasmid partitioning protein; K03497 chromosome partitioning protein, ParB family
Tiorf49 protein {ECO:0000313|EMBL:CDN95534.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
SCNpilot_expt_1000_bf_scaffold_2412_curated_27
unknown

Not on your lists

19968..20510
DNA (543bp) protein (181aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2412_curated_28
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20686..22149)
DNA (1464bp) protein (488aa)
lactate dehydrogenase n=1 Tax=Rhizobium leguminosarum RepID=UPI000363B202
Riorf93 protein {ECO:0000313|EMBL:BAB16212.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;"
N-6 DNA methylase
SCNpilot_expt_1000_bf_scaffold_2412_curated_29
Komagataeibacter intermedius, Komagataeibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22543..23361
DNA (819bp) protein (273aa)
Tiorf48 protein n=1 Tax=Rhizobium radiobacter RepID=Q9R6L1_RHIRD
Uncharacterized protein {ECO:0000313|EMBL:KIE59879.1}; TaxID=1458464 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Komagataeibacter.;" source="Komagataeibacter intermedius AF2.;"
SCNpilot_expt_1000_bf_scaffold_2412_curated_30
unknown

Not on your lists

23539..24903
DNA (1365bp) protein (455aa)

This feature has no annotations

Displaying items 1-30 of 49 in total

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