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SCNpilot_expt_1000_bf_scaffold_1280_curated_2

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(847..2046)

Top 3 Functional Annotations

Value Algorithm Source
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rh similarity UNIPROT
DB: UniProtKB
  • Identity: 77.6
  • Coverage: 389.0
  • Bit_score: 596
  • Evalue 2.90e-167
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Rhizobium giardinii RepID=UPI0003691579 similarity UNIREF
DB: UNIREF100
  • Identity: 80.4
  • Coverage: 388.0
  • Bit_score: 611
  • Evalue 6.30e-172
dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase similarity KEGG
DB: KEGG
  • Identity: 75.5
  • Coverage: 392.0
  • Bit_score: 586
  • Evalue 6.80e-165

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Taxonomy

Neorhizobium galegae → Neorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1200
ATGAAAGAGGCCGCGCCCACCAGACAGCGCCTGACCGTTCTCGGCTCGACCGGCTCCATCGGCGTCAACACGCTGGATGTGATCGGCCAGCTCGGCGGGCCGGAGCGCTTCGAGATGCTGGCGCTGACCGGAAACGGCAACATTCCGCTGCTGGCCGAACAGGCGAAACGCTGCCGCGCAAAACTCGCTGTCACCGCCGACGAGACGCGCCATGCGGAGCTGAAGGCGGCGCTGGCCGGCACCGGTATCGCCACGGCCGCCGGCCGCTCCGGCCTGATCGAGGCAGCGGAGATGGACGCCGGCTGGGTGATGGCCGCCATCGTCGGCACCGCCGGCCTTGCCCCCACCATCGCCGCCGCCAAACGTGGTGCCGATATCGCGCTCGCCAACAAGGAATGCCTGGTCTCGGCCGGAGATCTCTTCGTCGAGGCGGTGAAGGCCGGCGGCGGCCGGCTGATCCCGGTCGACAGCGAGCATAGCGCCATCTTCCAGTCGCTGGAGGACGACCAGCGCCATGCGCTGGAGCGCATCGTCCTGACCGCCTCGGGCGGCCCGTTCCGCACCTGGACGCGCCAGCAGATGGCCGAGGTGACCGTCGCCATGGCCCGCGCCCATCCCAACTGGTCGATGGGGTTGAAGATCTCGGTCGGCAGCGCCTCTATGTTCAACAAGGCGCTGGAGATGATCGAGGCCAAGCATCTCTTCGACGTGACGCCGGAGCAGATCGAGGTGATCGTGCATCCGCAGTCGATCGTCCATTCCATGGTCGGCTATACCGACGGCTCGGTGCTCGCCCAGCTCGGCTGCCCGGACATGCGCACCGCCATCGGCTATGCCCTGACCTACCCCAAGCGCCCGAAACTGAATGTCGAGCGGCTGGATTTCGCCAAACTCGCCCGCCTCGATTTCGAGGCCCCGGATGAAGTGCGTTTCCCGTCGCTGCGCCTTGCGCGGCTGGCCTTGACCCGCGGCGGCACGCAAGGCGCGGTGATGAACGCCGCCGAGGAAGGCGCGTTCCAGGCCTTCGTCGAGGAAAAGATCGGCTTCCTCGACATGGCCGAAATCGTGGAGGAGGTCATGGAAGCCATGACAGCCCACCCGCCTGCGGCCACGATGGAAGACGTCTTCGCCGCCGACACCGAAGCCCGCCGCCGCGCTGGCGAGATCGCCGGGCGGATTGCAGCATTCCGGAAACGCTAA
PROTEIN sequence
Length: 400
MKEAAPTRQRLTVLGSTGSIGVNTLDVIGQLGGPERFEMLALTGNGNIPLLAEQAKRCRAKLAVTADETRHAELKAALAGTGIATAAGRSGLIEAAEMDAGWVMAAIVGTAGLAPTIAAAKRGADIALANKECLVSAGDLFVEAVKAGGGRLIPVDSEHSAIFQSLEDDQRHALERIVLTASGGPFRTWTRQQMAEVTVAMARAHPNWSMGLKISVGSASMFNKALEMIEAKHLFDVTPEQIEVIVHPQSIVHSMVGYTDGSVLAQLGCPDMRTAIGYALTYPKRPKLNVERLDFAKLARLDFEAPDEVRFPSLRLARLALTRGGTQGAVMNAAEEGAFQAFVEEKIGFLDMAEIVEEVMEAMTAHPPAATMEDVFAADTEARRRAGEIAGRIAAFRKR*