name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_1280_curated_1
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2..850
|
Uncharacterized protein n=1 Tax=Rhizobium sp. AP16 RepID=J2D4H8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJK84584.1}; Flags: Precursor;; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1280_curated_2
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(847..2046)
|
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rh
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Rhizobium giardinii RepID=UPI0003691579
dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase
|
|
SCNpilot_expt_1000_bf_scaffold_1280_curated_3
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2213..2911
|
hypothetical protein n=1 Tax=Sinorhizobium medicae RepID=UPI00037B86D5
Uncharacterized protein {ECO:0000313|EMBL:KDP71311.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1280_curated_4
unknown
|
Not on your lists |
2936..3112
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_1280_curated_5
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3124..3942)
|
ABC transporter membrane spanning protein (Amino acid) n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9JUD4_AGRVS
amino acid ABC transporter permease; K02029 polar amino acid transport system permease protein
ABC transporter membrane spanning protein (Amino acid) {ECO:0000313|EMBL:ACM38057.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1280_curated_6
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4082..4879)
|
Periplasmic component of amino acid ABC-type transporter/signal transduction system n=1 Tax=Rhizobium sp. CF122 RepID=J2ICY0_9RHIZ
Putative amino acid ABC transporter, substrate-binding protein {ECO:0000313|EMBL:CDM59628.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;"
amino acid ABC transporter substrate-binding protein; K02030 polar amino acid transport system substrate-binding protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1280_curated_7
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5091..5618)
|
50S ribosomal protein L19 n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F5H9_9RHIZ
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
rplS; 50S ribosomal protein L19; K02884 large subunit ribosomal protein L19
|
|
SCNpilot_expt_1000_bf_scaffold_1280_curated_8
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5788..6516)
|
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=707241 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti (strain SM11).;"
tRNA (guanine-N(1)-)-methyltransferase n=7 Tax=Rhizobium meliloti RepID=TRMD_RHIME
rbh
trmD; tRNA (guanine-N(1)-)-methyltransferase
|
|
SCNpilot_expt_1000_bf_scaffold_1280_curated_9
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6521..7060)
|
Ribosome maturation factor RimM n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LRM9_RHITR
rimM; 16S rRNA processing protein RimM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1280_curated_10
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7562..7882)
|
Chorismate mutase {ECO:0000313|EMBL:EKF61185.1}; EC=5.4.99.5 {ECO:0000313|EMBL:EKF61185.1};; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;"
chorismate mutase; K04092 chorismate mutase [EC:5.4.99.5]
Chorismate mutase n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2Q7G8_9RHIZ
|
|
SCNpilot_expt_1000_bf_scaffold_1280_curated_11
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7897..9453)
|
Signal recognition particle protein n=1 Tax=Rhizobium sp. AP16 RepID=J2LAS3_9RHIZ
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
ffh; signal recognition particle GTP-binding protein; K03106 signal recognition particle subunit SRP54
|
|
SCNpilot_expt_1000_bf_scaffold_1280_curated_12
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9781..10779
|
membrane protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00037FD113
beta-lactamase family protein
Beta-lactamase family protein {ECO:0000313|EMBL:AGB72794.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1280_curated_13
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10866..11771
|
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium grahamii CCGE 502.;"
dapF; diaminopimelate epimerase; K01778 diaminopimelate epimerase [EC:5.1.1.7]
diaminopimelate epimerase n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI00035C4C81
|
|
SCNpilot_expt_1000_bf_scaffold_1280_curated_14
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11768..13042
|
hypothetical protein; K03423 [EC:1.8.-.-]
2-methylthioadenine synthase n=1 Tax=Rhizobium leguminosarum RepID=UPI00036FFAAF
MiaB-like tRNA modifying enzyme {ECO:0000313|EMBL:AHK42732.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1280_curated_15
unknown
|
Not on your lists |
comp(13566..13799)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_1280_curated_16
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14172..14411
|
Signal recognition particle receptor FtsY n=1 Tax=Rhizobium etli bv. mimosae str. Mim1 RepID=S5SNZ7_RHIET
signal recognition particle-docking FtsY protein
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=1328306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. Mim1.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1280_curated_17
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14498..15145
|
Probable intracellular septation protein A n=1 Tax=Rhizobium etli (strain CFN 42 / ATCC 51251) RepID=Q2K389_RHIEC
Probable intracellular septation protein A {ECO:0000256|HAMAP-Rule:MF_00189, ECO:0000256|SAAS:SAAS00082307}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
ispZ; intracellular septation protein A; K06190 intracellular septation protein
|
|
SCNpilot_expt_1000_bf_scaffold_1280_curated_18
Brucella canis, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15235..15975
|
Glycosyl transferase, family 25 n=80 Tax=Brucella RepID=A5VNR2_BRUO2
glycosyl transferase, family 25
Glycosyl transferase family 25 {ECO:0000313|EMBL:ABX61420.1}; TaxID=483179 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella canis (strain ATCC 23365 / NCTC 10854).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1280_curated_19
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15972..16679
|
Polysaccharide deacetylase n=1 Tax=Achromobacter piechaudii HLE RepID=J4YFF5_9BURK
Polysaccharide deacetylase {ECO:0000313|EMBL:EJO30543.1}; TaxID=1156919 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter piechaudii HLE.;"
polysaccharide deacetylase
|
|
SCNpilot_expt_1000_bf_scaffold_1280_curated_20
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16680..17315)
|
Putative transmembrane protein n=1 Tax=Rhizobium mesoamericanum STM3625 RepID=K0Q0P3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:AJC81330.1}; TaxID=1432049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. phaseoli str. IE4803.;"
hypothetical protein; K09125 hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1280_curated_21
Rhizobium nepotum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17432..17734)
|
50S ribosomal protein L28 n=10 Tax=Rhizobium/Agrobacterium group RepID=RL28_AGRT5
rpmB; 50S ribosomal protein L28; K02902 large subunit ribosomal protein L28
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=1368418 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium nepotum 39/7.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1280_curated_22
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17975..18748
|
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D3T2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR83572.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1280_curated_23
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18763..19188)
|
cupin n=1 Tax=Rhizobium leguminosarum RepID=UPI0003670D10
Cupin 5 domain-containing protein {ECO:0000313|EMBL:AJC81325.1}; TaxID=1432049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. phaseoli str. IE4803.;"
hypothetical protein; K09705 hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1280_curated_24
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19188..19958)
|
gloB; hydroxyacylglutathione hydrolase (EC:3.1.2.6); K01069 hydroxyacylglutathione hydrolase [EC:3.1.2.6]
Hydroxyacylglutathione hydrolase {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352}; EC=3.1.2.6 {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352};; Glyoxalase II {ECO:0000256|HAMAP-Rule:MF_01374}; TaxID=754523 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM1689.;"
hydroxyacylglutathione hydrolase n=1 Tax=Rhizobium leguminosarum RepID=UPI00036FBCCE
|
|
SCNpilot_expt_1000_bf_scaffold_1280_curated_25
Rhizobium sp. CCGE 510, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20045..20791
|
Type 11 methyltransferase n=1 Tax=Rhizobium sp. CCGE 510 RepID=J6DP04_9RHIZ
Type 11 methyltransferase {ECO:0000313|EMBL:EJT03654.1}; TaxID=1132836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CCGE 510.;"
type 11 methyltransferase
|
|
SCNpilot_expt_1000_bf_scaffold_1280_curated_26
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20897..21997
|
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
hisC1; histidinol-phosphate aminotransferase (EC:2.6.1.9)
Histidinol-phosphate aminotransferase n=1 Tax=Rhizobium sp. CF142 RepID=J1T1U7_9RHIZ
|
|
SCNpilot_expt_1000_bf_scaffold_1280_curated_27
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21994..22917
|
Protein tyrC: Cyclohexadienyl dehydrogenase (Arogenate dehydrogenase) (ADH) Prephenate dehydrogenase (PDH) {ECO:0000313|EMBL:CCF21153.1}; EC=1.3.1.12 {ECO:0000313|EMBL:CCF21153.1};; EC=1.3.1.43 {ECO:0000313|EMBL:CCF21153.1};; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
cyclohexadienyl dehydrogenase (EC:1.3.1.12); K00220 cyclohexadieny/prephenate dehydrogenase [EC:1.3.1.43 1.3.1.12]
Protein tyrC: Cyclohexadienyl dehydrogenase (Arogenate dehydrogenase) (ADH) Prephenate dehydrogenase (PDH) n=1 Tax=Rhizobium sp. RepID=L0NJ97_RHISP
|
|
SCNpilot_expt_1000_bf_scaffold_1280_curated_28
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22932..23942)
|
Uncharacterized protein n=1 Tax=Rhizobium sp. RepID=L0NLI7_RHISP
Uncharacterized protein {ECO:0000313|EMBL:CCF21152.1}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
hypothetical protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_1280_curated_29
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24040..24573
|
Cation transport protein ChaC n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LN33_RHITR
cation transport protein ChaC
Cation transport protein ChaC {ECO:0000313|EMBL:AGB72647.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1280_curated_30
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24712..25500)
|
plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase; K00655 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
rbh
Phospholipid/glycerol acyltransferase n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4FCJ8_9RHIZ
Phospholipid/glycerol acyltransferase {ECO:0000313|EMBL:EHS49447.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
|