ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1280_curated_5

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(3124..3942)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter membrane spanning protein (Amino acid) n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9JUD4_AGRVS similarity UNIREF
DB: UNIREF100
  • Identity: 76.2
  • Coverage: 269.0
  • Bit_score: 408
  • Evalue 4.20e-111
amino acid ABC transporter permease; K02029 polar amino acid transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 76.2
  • Coverage: 269.0
  • Bit_score: 408
  • Evalue 1.30e-111
ABC transporter membrane spanning protein (Amino acid) {ECO:0000313|EMBL:ACM38057.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.2
  • Coverage: 269.0
  • Bit_score: 408
  • Evalue 5.90e-111

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Agrobacterium vitis → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 819
ATGGCCTTGCAGACCCTTCCCGAGGGCGGCAGAGGCGGCTTTCCCTGGTGGCTCGCCGCGCTCGGCGCCATTGCGGTGGCGCTGGCCGCCGTCATCGCGTTGAACGGCCTCTATACCCAAGTCTTCGTCACCATATCCAAGGGCATCGGCGTGACGGTTTTCGTCACGCTGGTCGCCTTTGCGCTGGCCATGATTCTCGGCCTCGCCATCGCCCTGCTCGGTCTGTCCGACGCCCGGGCGCTGCGGGAGATCGCCCGGTTCTACATCGAGGTGATCCGTGGCATTCCGATGCTGGTGCTGTTGTTCTATATCGCCTTCGTCGGCGCTCCCGGCTTCGTGGCGCTCTACAATGCGCTGATGAGCCCGGCCATCTCCGCCGGTCTGATCGAGGCGCTGCAGGTGCGCGACGTCTCCTTGATGTGGCGTGCGGTCTTCGCGCTGACCATCGGCTATTCCGCCTTCATTGCCGAAATTTTTCGCGCCGGCATCCAGTCCGTCGACAAGGGCCAGATCGAGGCCGCCAAGGCGCTCGGCCTGACGCGCGTGCAGCGTTTCCGCCTCGTGGTGTTCCCCCAAGCGCTGAGGGTCGTCTTCCCGCCGCTGTCGAACGATTTCGTGGCGATGGTCAAGGATTCGTCGCTGGTCTCCGTGCTCGGCGTCGCCGACATCACCCAGATGGGCAAGGTCTACGCGTCCGGCTCGTTCCGCTTCTTCGAGACCTATTCCATCGTCGCCTATGTCTATCTGGTGCTGACCATCGGCCTGTCGCTTGCGCTTCGCGGTGTCGAGAAGCGCATGCGCCGGAAGTTCGTCAGATAA
PROTEIN sequence
Length: 273
MALQTLPEGGRGGFPWWLAALGAIAVALAAVIALNGLYTQVFVTISKGIGVTVFVTLVAFALAMILGLAIALLGLSDARALREIARFYIEVIRGIPMLVLLFYIAFVGAPGFVALYNALMSPAISAGLIEALQVRDVSLMWRAVFALTIGYSAFIAEIFRAGIQSVDKGQIEAAKALGLTRVQRFRLVVFPQALRVVFPPLSNDFVAMVKDSSLVSVLGVADITQMGKVYASGSFRFFETYSIVAYVYLVLTIGLSLALRGVEKRMRRKFVR*