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SCNpilot_expt_1000_bf_scaffold_1280_curated_21

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(17432..17734)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L28 n=10 Tax=Rhizobium/Agrobacterium group RepID=RL28_AGRT5 similarity UNIREF
DB: UNIREF100
  • Identity: 94.8
  • Coverage: 96.0
  • Bit_score: 178
  • Evalue 3.40e-42
rpmB; 50S ribosomal protein L28; K02902 large subunit ribosomal protein L28 similarity KEGG
DB: KEGG
  • Identity: 94.8
  • Coverage: 96.0
  • Bit_score: 178
  • Evalue 1.10e-42
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=1368418 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium nepotum 39/7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.8
  • Coverage: 96.0
  • Bit_score: 178
  • Evalue 4.80e-42

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Taxonomy

Rhizobium nepotum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 303
ATGTCGCGTGTATGCGAATTGACGGGCAAGGGCGTCCAGGTTGGCAACAACGTCAGCCACGCCAACAACAAGACCAAGCGCCGCTTCCTTCCGAATCTGTGCAACGTGACGCTGATCTCCGACGCTCTCGGCCAGCGTTTCCGTCTGCGCGTTTCGGCTGCTGCCCTGCGCTCGGTCGAACATCGCGGCGGCCTCGACGCTTTCCTGCTGAAGGCCCACGAGAACGAACTGAGCATGCGCGCCCGTCTGCTGCGCCGCCAGATCGCCAAGAAGTCGGCCGAAGCCGCTGCTGCCGCTGCCTGA
PROTEIN sequence
Length: 101
MSRVCELTGKGVQVGNNVSHANNKTKRRFLPNLCNVTLISDALGQRFRLRVSAAALRSVEHRGGLDAFLLKAHENELSMRARLLRRQIAKKSAEAAAAAA*