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SCNpilot_expt_1000_bf_scaffold_1280_curated_13

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 10866..11771

Top 3 Functional Annotations

Value Algorithm Source
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium grahamii CCGE 502.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.1
  • Coverage: 301.0
  • Bit_score: 512
  • Evalue 5.50e-142
dapF; diaminopimelate epimerase; K01778 diaminopimelate epimerase [EC:5.1.1.7] similarity KEGG
DB: KEGG
  • Identity: 81.4
  • Coverage: 301.0
  • Bit_score: 509
  • Evalue 6.10e-142
diaminopimelate epimerase n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI00035C4C81 similarity UNIREF
DB: UNIREF100
  • Identity: 82.7
  • Coverage: 301.0
  • Bit_score: 513
  • Evalue 1.30e-142

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Taxonomy

Rhizobium grahamii → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 906
ATGAGCAACACGGTCGAATTCGCCCGGATGAACGGGCTTGGCAACAAGATCCTCGTGATCGACATGCGCGGCCGACGGGACATGGTGACGCCGGCCGCCGCGATTAAGCTTGCCGGTGACGCCGAGACCGCTTTCGACCAGATCATGGCGATCCACGATCCCAGGGCCGACGGCACCGATGCCTGGATCGACATCCTCAATTGCGACGGCACCAGAGCGCAAGCCTGCGGCAACGGCACGCGCTGCGTCGTGCAGGCGCTGGCCTCCGAAACCGGCAAGAAGACCTTCACCTTCCAGACGGTCGCCGGCATCCTCAATGCGCGGGAGCATGAGGATGGCCTGATCTCCGTCGACATGGGCAAGCCGGTATTTGCCTGGGACCATATTCCGCTGGCGGAGGAATTCCACGATACCAGCCGTATCGAATTGCAGATCGGCCCGATCGACAACCCCGTGCTGCATTCGCCTTCTGTCATGTCGATGGGCAATCCGCATGCGGTCTTCTGGGTGGATCGCGATCCCATGGACTTCGACCTGCACCGTTTCGGCCCGCTGCTCGAAAACCACCCGATGTTTCCCGAAAAGGCCAATATCACGCTGGCGCATGTGACCTCCGACAGCGCGATGACGACGCGGACCTGGGAGCGCGGCGCAGGGCTGACGCTGGCCTGCGGCTCCGCCGCCTGTTCGGCCGCCGTCAGCGGTGCGCGCACGGGACGCACCGGCCGCAAGGTTGCGGTCATCGTCGCCAGCAGCCCGAACCGCGGCACGCTGCACATCGAATGGCGCGAGCGCGACGACCATGTGGTCATGACCGGCCCGGCCGAATGGGAATGGGCGGGCGTGCTCGATCCGACGACCGGCGCCTGGCAGCGGCAGGCGGAAAACGAGGCGGGGGCGCGGTGA
PROTEIN sequence
Length: 302
MSNTVEFARMNGLGNKILVIDMRGRRDMVTPAAAIKLAGDAETAFDQIMAIHDPRADGTDAWIDILNCDGTRAQACGNGTRCVVQALASETGKKTFTFQTVAGILNAREHEDGLISVDMGKPVFAWDHIPLAEEFHDTSRIELQIGPIDNPVLHSPSVMSMGNPHAVFWVDRDPMDFDLHRFGPLLENHPMFPEKANITLAHVTSDSAMTTRTWERGAGLTLACGSAACSAAVSGARTGRTGRKVAVIVASSPNRGTLHIEWRERDDHVVMTGPAEWEWAGVLDPTTGAWQRQAENEAGAR*