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SCNpilot_expt_1000_bf_scaffold_1280_curated_11

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(7897..9453)

Top 3 Functional Annotations

Value Algorithm Source
Signal recognition particle protein n=1 Tax=Rhizobium sp. AP16 RepID=J2LAS3_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 93.1
  • Coverage: 521.0
  • Bit_score: 946
  • Evalue 8.20e-273
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.1
  • Coverage: 521.0
  • Bit_score: 946
  • Evalue 1.10e-272
ffh; signal recognition particle GTP-binding protein; K03106 signal recognition particle subunit SRP54 similarity KEGG
DB: KEGG
  • Identity: 92.9
  • Coverage: 521.0
  • Bit_score: 945
  • Evalue 5.70e-273

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Taxonomy

Rhizobium sp. AP16 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1557
ATGTTTGAGAGCCTGCAGGAGCGCCTTGGGTCCATCCTCAACGGATTGACCGGTCGCGGCGCGCTATCGGAAGCGGATGTCGCCGCCGCCCTGCGCGAGGTTCGCCGCGCGCTGCTGGAAGCCGACGTGGCGCTCGAAGTCGTGCGCTCCTTCACCGATCGCGTCCGCGAGAAGGCAGTCGGCGCAGAAGTCCTGAAGTCGATCAAGCCCGGCCAGATGGTCGTCAAGATCGTCCATGACGAGCTGGTCGAGATGCTGGGCTCGGAAGGTGCGAGCATCGATCTCAATGCGCCCGCCCCCGTCGTCCTGATGATGGTCGGCCTGCAGGGCTCGGGCAAGACCACGACCACTGCCAAGATCGCCAACCGGCTGAAGACGCGCGACAAGAAAAAGGTCCTGATGGCCTCGCTCGACACGCGCCGTCCGGCAGCGCAGGAGCAGCTTCGCCAGCTGGGCGTCCAGGTCAGCGTCGACACGCTGCCGATCATCGCGGGACAGTCGCCGACCGATATCGCCGCCCGCGCCGTTCAGGCGGCCAAGCTCGGCGGCCATGACGTCGTCATCCTCGATACCGCCGGCCGTACCCATATCGACGAGCCGCTGATGGTCGAGATGGCCGACATCAAGAAGCGCTCGAACCCGCATGAAATCCTGCTGGTCGCCGACAGCCTGACCGGTCAGGACGCCGTCAACCTCGCCCGCAATTTCGACGAACGCGTCGGCATCACCGGCCTGGTGCTCACTCGCATGGACGGCGACGGACGCGGCGGTGCGGCCCTTTCGATGCGCGCCGTCACCGGCAAGCCGATCAAGCTGATCGGCGTCGGCGAGCGCATGGGCGAGTTGGAGGAATTCCACCCCCGCCGCATCGCCGACCGCATCCTCGGCATGGGCGACATCGTCTCGCTGGTCGAAAAGGCCGCAGAGAATATCGACGCCGAAAAGGCGGCCGCCATGGCCGCCAAGATGGCCAAGGGCAAGTTCGACCTCAACGATCTCGCCGACCAGATCGCCCAGATGCAGAAGATGGGCGGCATGGGCGGTATCATGGGCATGATGCCAGGCATGAGCGGCATGAAGGACAAGCTGTCCGCCGCCGGCCTCGACGACAAGCTGTTCCGCCGCCAGCTCGCCATCATCTCCTCGATGACCAAGGCCGAGCGCGCCAATCCCGATCTTCTGAAGCATTCCCGCAAGAAGCGCATCGCGTCCGGCTCCGGCACCGATGCGGCCGACATCAACAAGCTCTTGAAGATGCATCGCCAGATGGCCGACATGATGAAGATGATGGGCGGCAAGGGCAAGGGCGGCATGATGAAGCAGATGATGGGCGGCCTTGCCGGCAAGATGGGTCTCGGCGGCGGCATGGGCGGTATGCCCGACCTGTCGAAGCTCGATCCGAAGCAGCTCGAAGCCCTGCAGAAGCAGGCGGAAGCGGCCGGCCTCGGCAAGCCGGGCGGCATGCCCGGTCTGGGCGGTGGCCTGCCGGGCCTTGGCGGAAAGCTTCCCGGTCTCGGCGGCTTCCCCGGCCTTCCCGGCCTGCCCAAGAAGAAGTGA
PROTEIN sequence
Length: 519
MFESLQERLGSILNGLTGRGALSEADVAAALREVRRALLEADVALEVVRSFTDRVREKAVGAEVLKSIKPGQMVVKIVHDELVEMLGSEGASIDLNAPAPVVLMMVGLQGSGKTTTTAKIANRLKTRDKKKVLMASLDTRRPAAQEQLRQLGVQVSVDTLPIIAGQSPTDIAARAVQAAKLGGHDVVILDTAGRTHIDEPLMVEMADIKKRSNPHEILLVADSLTGQDAVNLARNFDERVGITGLVLTRMDGDGRGGAALSMRAVTGKPIKLIGVGERMGELEEFHPRRIADRILGMGDIVSLVEKAAENIDAEKAAAMAAKMAKGKFDLNDLADQIAQMQKMGGMGGIMGMMPGMSGMKDKLSAAGLDDKLFRRQLAIISSMTKAERANPDLLKHSRKKRIASGSGTDAADINKLLKMHRQMADMMKMMGGKGKGGMMKQMMGGLAGKMGLGGGMGGMPDLSKLDPKQLEALQKQAEAAGLGKPGGMPGLGGGLPGLGGKLPGLGGFPGLPGLPKKK*