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SCNpilot_expt_1000_bf_scaffold_1280_curated_9

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(6521..7060)

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimM n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LRM9_RHITR similarity UNIREF
DB: UNIREF100
  • Identity: 80.7
  • Coverage: 181.0
  • Bit_score: 307
  • Evalue 6.70e-81
rimM; 16S rRNA processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 80.7
  • Coverage: 181.0
  • Bit_score: 307
  • Evalue 2.10e-81
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.7
  • Coverage: 181.0
  • Bit_score: 307
  • Evalue 9.40e-81

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Taxonomy

Rhizobium tropici → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 540
ATGAGCAAGCTTGAAAATCCCGTCTTGATGGCGACGGTCGGCGCGGCGCAGGGGTTGCGCGGCGAGGTGCGCGTCAAGACGTTCACCGCCGATCCGACGGCGCTCGGCGACTATGGCAACCTGCACAGTCTCGACGGGCGCACCTTCGAGATCCTCGACATCCGCGAAGCCAAGAATATCGCGATCGTCCGCTTCCGCGGCATCAACGACCGCAACGCGGCCGAGGCGCTGAACGGCCTCGATCTCTATGTCGAGCGCGACAACCTGCCCGACGACGAGCTGGAGGACGACGAGTTCTTCTATGCCGATCTCGAAGGGCTGGAGGCGCTCGATGCCGATGGCAAGAGCTACGGCACCGTCAGCGCCGTCTTCGATTTCGGCGCCGGCGACCTGCTGGAACTGAAAGGCCCGGGCCGCCGCCCGGTGCTGATTCCCTTCTCGGAAAAGGCGGTGCTGGAAATCGATCTCGAAGGCGGCACGCTGCTGATCGATCCGGCCGCCGCCGGGTTGATCGACGAGCCGGATGACGGCAAGCCCTGA
PROTEIN sequence
Length: 180
MSKLENPVLMATVGAAQGLRGEVRVKTFTADPTALGDYGNLHSLDGRTFEILDIREAKNIAIVRFRGINDRNAAEALNGLDLYVERDNLPDDELEDDEFFYADLEGLEALDADGKSYGTVSAVFDFGAGDLLELKGPGRRPVLIPFSEKAVLEIDLEGGTLLIDPAAAGLIDEPDDGKP*