ggKbase home page

SCNpilot_expt_1000_bf_scaffold_2579_curated_1

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(3..536)

Top 3 Functional Annotations

Value Algorithm Source
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains n=1 Tax=Rhizobium sp. CF080 RepID=J2K628_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 92.7
  • Coverage: 178.0
  • Bit_score: 331
  • Evalue 4.30e-88
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:EUB95794.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.7
  • Coverage: 178.0
  • Bit_score: 331
  • Evalue 6.00e-88
ntrX; two-component response regulator nitrogen regulation protein; K13599 two-component system, NtrC family, nitrogen regulation response regulator NtrX similarity KEGG
DB: KEGG
  • Identity: 92.1
  • Coverage: 178.0
  • Bit_score: 327
  • Evalue 1.90e-87

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium sp. CF080 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 534
GTGCGCATCATCTCGTCTACCGCCTATAATCTCGAGAGCCATATCGCCGAGGGCGCCTTCCGCGAGGATCTGTATCATCGCCTCGCCGTCGTGCCGGTGCGCGTGCCGGCGCTGGCCGAGCGGCGCGAGGACATCCCGTTCCTCGTCGACATGTTCATGCGTCAGATTTCCGAGCAGGCCGGTATTCGCCAGCGCCGCATCGGCGACGACGCCATGGCGGTGCTGCAGGCGCATGACTGGCCGGGCAATATCCGCCAGCTTCGCAACAACATCGAGCGGCTGATGATTCTCGCCCGTTCCGATGGCCCGGATTCGCCGATTACCGCCGACATGCTGCCGACCGATCTGGGCGACATGCTGCCGAAAACCACCTCGGGCGGCGACTATCACATCATGACCTTGCCGTTGCGCGAAGCCCGCGAGATGTTCGAGCGCGATTACCTGATCGCCCAGATCAACCGCTTCGGCGGCAACATTTCGCGCACGGCGGAATTCGTCGGCATGGAGCGCTCGGCGCTGCACCGTAAGCTGAAA
PROTEIN sequence
Length: 178
VRIISSTAYNLESHIAEGAFREDLYHRLAVVPVRVPALAERREDIPFLVDMFMRQISEQAGIRQRRIGDDAMAVLQAHDWPGNIRQLRNNIERLMILARSDGPDSPITADMLPTDLGDMLPKTTSGGDYHIMTLPLREAREMFERDYLIAQINRFGGNISRTAEFVGMERSALHRKLK