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SCNpilot_expt_1000_bf_scaffold_2579_curated_26

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(24437..24700)

Top 3 Functional Annotations

Value Algorithm Source
Protein RecA n=27 Tax=Rhizobium RepID=RECA_RHIEC similarity UNIREF
DB: UNIREF100
  • Identity: 94.2
  • Coverage: 86.0
  • Bit_score: 167
  • Evalue 5.30e-39
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=1432050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. IE4771.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.3
  • Coverage: 86.0
  • Bit_score: 168
  • Evalue 3.30e-39
recA; recombinase A; K03553 recombination protein RecA similarity KEGG
DB: KEGG
  • Identity: 94.2
  • Coverage: 86.0
  • Bit_score: 167
  • Evalue 1.70e-39

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Taxonomy

Rhizobium etli → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 264
GGCGAAGGCGTCTCGAAGACCGGCGAACTGGTCGATCTCGGCGTCAAGGCCGGTATCGTCGAGAAGTCCGGTGCCTGGTTCTCCTATAACAGCCAGCGCCTGGGGCAGGGGCGTGAAAACGCCAAGTCCTTCCTGCGCGACAATCCTGATCTCGCCCGTGAGATCGAAATGGCTCTGCGCCAGAATGCCGGCCTGATCGCCGACCGCTTCTTGCAGAACGGCGGCCCGGAAGCCGAGGATGGGGATTCGGCGGCGGAAGCTTAA
PROTEIN sequence
Length: 88
GEGVSKTGELVDLGVKAGIVEKSGAWFSYNSQRLGQGRENAKSFLRDNPDLAREIEMALRQNAGLIADRFLQNGGPEAEDGDSAAEA*