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SCNpilot_expt_1000_bf_scaffold_3388_curated_1

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 1..1317

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CPE7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 89.7
  • Coverage: 438.0
  • Bit_score: 810
  • Evalue 7.70e-232
Type VI secretion protein, EvpB/VC_A0108 family {ECO:0000313|EMBL:EYR83978.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.7
  • Coverage: 438.0
  • Bit_score: 810
  • Evalue 1.10e-231
hypothetical protein; K11900 type VI secretion system protein ImpC similarity KEGG
DB: KEGG
  • Identity: 77.4
  • Coverage: 438.0
  • Bit_score: 705
  • Evalue 1.10e-200

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1317
CTGACGCAGACCTTCAACAAGGCGATCGAGGCCATCGACCAGAAGCTGTCACAGCAGCTGAGCCAGATCATGCATCACCCGGACTTCCAGAAGCTGGAAGGGTCCTGGCGCGGCCTGAACTATCTGGTGAAGAACTCGGAAACCAGCGCGACGCTGAAGATCCGCGTTCTCAACGAATCCAAGAAGGAACTGCACAAGGATCTGACCAAGGCGGTCGAATTCGATCAGAGCCAGACCTTCAAGAAGATCTATGAAAGCGAATTCGGCACCCCCGGCGGCGAGCCCTACGGCGCGCTGATCGGCGATTTCGAATTCGGCAACGGCACCGAGGATCTCGAAATCCTGCAGGGCATGTCGAACATCGCGGCCGCGTCCTTCGCGCCGTTCATCTCCGCCGCCAGCCCGAAGATGTTCGGCCTGGAAAGCTTCACGGAACTTTCCAAGCCGCGCGATCTCGAGAAGATCTTCGAAAGCTCGGAATACATCAAGTGGCGCAGCTTCCGCGACAGCGACGATAGCCGCTTCGTGACGCTGACCATGCCGCGCGTGCTCGCCCGCGTGCCCTACGGTTCGCAGGGCCGGGCGATCGAGGAGTTCAAGTTCGAGGAAGCCCCGATCGACGCCAACGGCGTCGTCAGCGCCATGCCGCAGGACAAGTTCTCCTGGATGAACGCATCCTACGCGCTGGGCGAACGCCTGAACTTCGCCTTCGCGAAGTATGGCTGGTGCGTGGCCATCCGCGGTGCCGAGGGTGGCGGCAAGGTCGAGGATCTGCCGAGCTTCACCTTCACCAGCGACGACGGCGACGCCGACCAGCAGTGCCCGACGGAAATCGGCATCACCGATCGCCGCGAGGCCGAACTGTCGAAGCTCGGCTTCCTGCCGCTGTGCCACTATAAGAATACGGATTACGCCGTCTTCTTCGGGGCGCAGACCACGCAGAAGCCGAAGAAATACGACCGGCCGGAAGCCACCGCAAATGCGGCGATTTCCGCCCGCCTGCCGTATATCATGGCGACCTCGCGTTTCTCGCACTACCTCAAGGTCATGGGCCGCGACAAGATCGGCTCCTTCCTCGAAGCCAGCGATTGCGAGACCTGGCTGAACAACTGGATCCGCAACTATGTGAATGGCAATGCGGAAGCCGGCCAGGAAATGAAGGCGCAGTATCCGCTCGCCGAAGCGCAGGTGACCGTCAAGGAAGTTCCCGGCGCGCCGGGTTCCTACAATGCGGTCGCCTATCTGCGCCCCTGGTTGCAGATGGAAGAGCTGACGGCGTCCATGCGCCTTGTGGCACGCATTCCGCAGATGGGTTGA
PROTEIN sequence
Length: 439
LTQTFNKAIEAIDQKLSQQLSQIMHHPDFQKLEGSWRGLNYLVKNSETSATLKIRVLNESKKELHKDLTKAVEFDQSQTFKKIYESEFGTPGGEPYGALIGDFEFGNGTEDLEILQGMSNIAAASFAPFISAASPKMFGLESFTELSKPRDLEKIFESSEYIKWRSFRDSDDSRFVTLTMPRVLARVPYGSQGRAIEEFKFEEAPIDANGVVSAMPQDKFSWMNASYALGERLNFAFAKYGWCVAIRGAEGGGKVEDLPSFTFTSDDGDADQQCPTEIGITDRREAELSKLGFLPLCHYKNTDYAVFFGAQTTQKPKKYDRPEATANAAISARLPYIMATSRFSHYLKVMGRDKIGSFLEASDCETWLNNWIRNYVNGNAEAGQEMKAQYPLAEAQVTVKEVPGAPGSYNAVAYLRPWLQMEELTASMRLVARIPQMG*