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SCNpilot_expt_1000_bf_scaffold_3388_curated_5

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 4622..5605

Top 3 Functional Annotations

Value Algorithm Source
Periplasmic binding protein/LacI transcriptional regulator n=4 Tax=Rhizobium meliloti RepID=F6C458_SINMB similarity UNIREF
DB: UNIREF100
  • Identity: 88.7
  • Coverage: 327.0
  • Bit_score: 572
  • Evalue 3.50e-160
Putative galactose ABC transporter,periplasmic solute-binding protein similarity KEGG
DB: KEGG
  • Identity: 88.7
  • Coverage: 327.0
  • Bit_score: 572
  • Evalue 1.10e-160
ABC transporter, periplasmic solute-binding protein {ECO:0000313|EMBL:AEH83509.1}; TaxID=707241 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti (strain SM11).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.7
  • Coverage: 327.0
  • Bit_score: 572
  • Evalue 4.90e-160

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Taxonomy

Sinorhizobium meliloti → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 984
ATGTCTCGTTTTACACGACGTGCATTCCTGTTGACGGCCGGCGTTGCCGGCGCGCTTGCCTTCACCGGCACCATGGCGCTCGCCGAACTGCCCGCGCTCGCCAAGAAGGACAAATACAAGGTCGGCTTTGCCCAGACCGAGAGCAACAATCCCTGGCGCATCGCCCAGACCAATTCCATGAAGGCCGAAGCCGAGAAGAATGGCATTCAGCTCGTCTATACCGATGCCGCCGGCTCCGCCGCCAAGCAGGTCGCCGACGTCAATTCGATGATCGCCCAAGGCGTCGACGTCATCTTCCTTGCCCCGCGTGAGGAAAAGCCGCTGATCCCGGCGGTCATGGCCGCCAAGAAGGCCGGCATCCCGGTCATCCTGCTCGACCGCAGCGTCGATCCTTCGCTCGCAAAGCCGGGCGAAGACTACGTGACCTTCATCGGCTCCGACTTCATCGCCGAGGGCAAGCGTGTCGCCGAATGGCTGGCGAAGAACGCCAACGGCAAGTCGAAGATCATCGAATTAGAAGGCACGACCGGCTCGTCGCCTGCCAACGACCGCAAGAAGGGGTTCGACGACGCGATCAAGGCCGCCGGCGGCTTCGACATCGTTGCCTCGCAGAGCGGCGATTTCGCCCGCGACAAGGGCCGGCAGGTGGCGGAAGCCCTGCTGCAGGCCCATCCCGATGCCGATATCGTCTATGCCCATAACGACGAAATGGCCATCGGCGCCATCGCGGCGATCGAGGCGGCCGGCAAGGCGCCGGGCAAGGATGTCCTCGTCCTGTCCATCGACGGCGGCAAGGAAGCCGTGCAGGCGGTCGTGGACGGCAAGATCGCCGCCGTGGTCGAATGCAATCCGCGCTTTGGGCCGAAGGCATTCGAGACTATGATGCGTTATGCCAAGGGCGAGAAGATCGAGCCCTGGGTCATCAATACGGACAAGTTCTACGATTCGACCAACGCCAAGGACGAGATCGCCGACGCCTATTAA
PROTEIN sequence
Length: 328
MSRFTRRAFLLTAGVAGALAFTGTMALAELPALAKKDKYKVGFAQTESNNPWRIAQTNSMKAEAEKNGIQLVYTDAAGSAAKQVADVNSMIAQGVDVIFLAPREEKPLIPAVMAAKKAGIPVILLDRSVDPSLAKPGEDYVTFIGSDFIAEGKRVAEWLAKNANGKSKIIELEGTTGSSPANDRKKGFDDAIKAAGGFDIVASQSGDFARDKGRQVAEALLQAHPDADIVYAHNDEMAIGAIAAIEAAGKAPGKDVLVLSIDGGKEAVQAVVDGKIAAVVECNPRFGPKAFETMMRYAKGEKIEPWVINTDKFYDSTNAKDEIADAY*