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SCNpilot_expt_1000_bf_scaffold_3250_curated_7

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 4113..5066

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00036EA1C8 similarity UNIREF
DB: UNIREF100
  • Identity: 56.4
  • Coverage: 319.0
  • Bit_score: 321
  • Evalue 1.00e-84
Uncharacterized protein {ECO:0000313|EMBL:EKS36340.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.7
  • Coverage: 318.0
  • Bit_score: 311
  • Evalue 1.10e-81
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 45.5
  • Coverage: 299.0
  • Bit_score: 242
  • Evalue 1.90e-61

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 954
GTGCTGCGCTTCACGACGGACGACATTCCCGCTCAGGACCGGTTCGAACATTGGCGCGAGACGCGCGGCAGGAACCTGTTCGGCGTCACCATCGAGCTGGACCGGGAAAAGCGCGGCGATTTCAGCGGGCATTTTACTGCTGAAGCCTATGGCGGCGCGATCGTTTCGGAACTGCAAGCTTCGGCTTACCGAGTCAGCCGCACCCCGCAGGATATCGCCCGCCTGTCCAGCGACAGCCTGTTGCTCGGCTGGCAGATCGAGGGCGGCGGCTGGATGGAGACCGGCCGGCGGGCGGCCCTGCACCGCATCGACAGCGGCGCCTTCACTGTCGGCCATTCCGAGCAGACCTATTCGGGGACGCCGAACACGGATCGCCGCTTCCTGTGGCGCATGATCAAGATCCCGCTCGCCGGCTGCGATTTCGCGCCGCCGCTCGCCGATCTCGCCAGCCAGCCGATCTGTGCCGCCTGGCTGCGGCCGGTGACCGCGCTGTTTTTGGCGATCGGCGCGCGCGATGCCGTGCTGCCCGATCCTGCGGCCGGCATCGATGCCATCGGCCGGCTGGCGCTGGTGGCGACGGGACGCCTGCCGCATCACGCGCCGGAAAACCGGGCCGCGCTGCGGCTGGCGCTGCTGCAGGCCGCTCGCGCCATCCTGCGGCGTGATCTCGACCGCCCGGACCTCTCGCCCTCGCTTGTCGCCCGCGAACTGGGCGTTTCGCCGCGGCAGCTCCACATCCTGTTCGAGCCTTCCGGCCTGTCCTTCGCCCGCACGCTCACCGGCTTCCGGCTGGAGCGGGCGCTGCGCCTGCTGCTGCACCGGCAGGAGCGCACGGTGGCCGACATCGCCTATGCCTGCGGGTTCGACAGCCTCGCCACCTTCTACCGGGCGTTTCGCGCCGCCTACGGCATGACGCCGCTGGACATGCGGGCCATGCCGCCGGCCGTGGTTTGA
PROTEIN sequence
Length: 318
VLRFTTDDIPAQDRFEHWRETRGRNLFGVTIELDREKRGDFSGHFTAEAYGGAIVSELQASAYRVSRTPQDIARLSSDSLLLGWQIEGGGWMETGRRAALHRIDSGAFTVGHSEQTYSGTPNTDRRFLWRMIKIPLAGCDFAPPLADLASQPICAAWLRPVTALFLAIGARDAVLPDPAAGIDAIGRLALVATGRLPHHAPENRAALRLALLQAARAILRRDLDRPDLSPSLVARELGVSPRQLHILFEPSGLSFARTLTGFRLERALRLLLHRQERTVADIAYACGFDSLATFYRAFRAAYGMTPLDMRAMPPAVV*