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SCNpilot_expt_1000_bf_scaffold_3250_curated_11

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 8451..9422

Top 3 Functional Annotations

Value Algorithm Source
Putative amino-acid transport system permease ABC transporter protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EQD5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 88.9
  • Coverage: 323.0
  • Bit_score: 560
  • Evalue 1.00e-156
Putative amino-acid transport system permease ABC transporter protein {ECO:0000313|EMBL:EYR82685.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.9
  • Coverage: 323.0
  • Bit_score: 560
  • Evalue 1.40e-156
amino acid ABC transporter permease; K02029 polar amino acid transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 81.1
  • Coverage: 323.0
  • Bit_score: 526
  • Evalue 5.20e-147

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 972
ATGATCGGCCGATTGATACTGACCTATCCGGAGGCGTCGCGTCGCGCCGCGAGCCTGTTCTTCCTTCTCGTCGTGACGCTTGGCCTCTACCAGCTCGGCATCAGTTCGGCCTGGCTTGGGCATCTTCTGCCGATGTCGGCCGCCTGGCTCGGCGAAAACCAGGCCGCCGGCCGGCTGGTCTCGGCGCTGCTGATCGCGCTGATCGTCGCCGCCAATTGGAAGTTGCTGCGGCAATTGTCGCGCCGTCAGCAGGTGGTCGGCGTCTGGGTCGAGCTGTTCGCCCTGCTGATGCTGTTCTTCTATTCCTTCGACCTGTCCTTCGCCTTCATCGCCAAGAAGATCGGCTACCTGATCACGCAAGGGGTGACGACGACGCTCTATATCTCGGCGATCTCGATCATCATCGCCACGGTGATCGCGCTGGCCGGCGCCATCGCCAAGCTGTCGACCAACGGTGTCATCTACGGTCTTGCGACCTTCTACACCTCGCTGTTTCGCGGCCTGCCGCTGCTCATGCAGATCTACATCATCTATCTCGGCCTGCCGCAGGTGGGCTACGTCATCGGCGCGGTGCCGGCCGGCATTCTGGCGTTGTCGCTGTGCTACGGCGCCTATATGACCGAAATCTTCCGCGCCGGCATCGAAAGCATTCCGCGCGGGCAGACGGAAGGCGCGACCGCTCTGGGACTCAGCCCCTCGCAGACCATGGCGCTGGTCGTCCTTCCGCAGGCGATGCGGGTCATCATTCCGCCGACCGGCAATCAGTTCATCGCCATGCTGAAGGATTCTTCGCTGGTCTCGGTCGTCGGCGTCTGGGAAATCATGTATCTCGCCCGCACCCAGGGGCAGACGGAGTTCCGCCACATCGAAATGCTGATCACCGCCTCGATGATCTACTGGATCCTGTCCATCTGCCTCGAATATGCGCAGGCCCGGATCGAGGAAAGGTTCGGCCGCTTCAATGTCCGCTGA
PROTEIN sequence
Length: 324
MIGRLILTYPEASRRAASLFFLLVVTLGLYQLGISSAWLGHLLPMSAAWLGENQAAGRLVSALLIALIVAANWKLLRQLSRRQQVVGVWVELFALLMLFFYSFDLSFAFIAKKIGYLITQGVTTTLYISAISIIIATVIALAGAIAKLSTNGVIYGLATFYTSLFRGLPLLMQIYIIYLGLPQVGYVIGAVPAGILALSLCYGAYMTEIFRAGIESIPRGQTEGATALGLSPSQTMALVVLPQAMRVIIPPTGNQFIAMLKDSSLVSVVGVWEIMYLARTQGQTEFRHIEMLITASMIYWILSICLEYAQARIEERFGRFNVR*