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SCNpilot_expt_1000_bf_scaffold_3250_curated_16

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 12389..13120

Top 3 Functional Annotations

Value Algorithm Source
GntR family transcriptional regulator n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CXI1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 81.9
  • Coverage: 243.0
  • Bit_score: 405
  • Evalue 3.20e-110
Transcriptional regulator {ECO:0000313|EMBL:AHK47092.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.0
  • Coverage: 243.0
  • Bit_score: 409
  • Evalue 3.10e-111
ymfC; HTH-type transcriptional regulator YmfC similarity KEGG
DB: KEGG
  • Identity: 80.7
  • Coverage: 243.0
  • Bit_score: 403
  • Evalue 6.50e-110

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Taxonomy

Ensifer adhaerens → Ensifer → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 732
TTGGAGGAGCCCCTTCGCGATTCCCGCACCCTTGCCGTTCAGTTGCGTGACCGGATCGCCGACCTGATCCGTTCGGAGGGACTGAAGCCTGGCGACAAGCTGCCGACCGAGGCGCAGCTGACCCAGCGTTTCAAGATTTCCCGGCCGGCGCTGCGCGAGGCGCTGAAACTGCTGGAACAGGACGACATCATCTATGTCGAGCATGGGCGCGGCCGGTTCGTCTCGGCGCTGTCGGCGGTGCAGGTCGATCGTCCCATCACCGTGTTCGAAAGCGTCACCGACATGACGCGGCATTACGGCTATCGGCCGGTCAACAAGGTTCTGTCGATCTCGGAGGAGAAGCCGGACAAGCGGCTGGCCGAGGATCTGCAACTCGCGCAGGGCGACCGCGTCATCCGCATCGAGCGGCTGCGGCTGCACGAGGATGCGCCGATCCTCTATTGCGTCGATTACGTGCCGCGCAGCATCATCCCGACGCGGCTGTTCGACATCGACTGGAGCGGCTCGCTGATCGCGCTGCTGGACACGTATCGCAACCGTCCCCGCATGTCGGCAGCCACCGTTTCGGCCGTGCTGCTGCCGCAGGACGTGGTCGAACGGCATGATCTCGGCGATTTCGGCCCGGCGCTGCTGATCAAGGAAATCTGTTTCAACGCAGCCGGCGTTCCGGTCAACTATGCCATCGACTACCATCGCGGCAGCCATTTTTCCTTCAGCCTGACGCGCAAATAA
PROTEIN sequence
Length: 244
LEEPLRDSRTLAVQLRDRIADLIRSEGLKPGDKLPTEAQLTQRFKISRPALREALKLLEQDDIIYVEHGRGRFVSALSAVQVDRPITVFESVTDMTRHYGYRPVNKVLSISEEKPDKRLAEDLQLAQGDRVIRIERLRLHEDAPILYCVDYVPRSIIPTRLFDIDWSGSLIALLDTYRNRPRMSAATVSAVLLPQDVVERHDLGDFGPALLIKEICFNAAGVPVNYAIDYHRGSHFSFSLTRK*