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SCNpilot_expt_1000_bf_scaffold_8333_curated_1

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 1..636

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547};; 23S rRNA Um2552 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; rRNA (uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.3
  • Coverage: 211.0
  • Bit_score: 336
  • Evalue 2.20e-89
23S rRNA methyltransferase n=1 Tax=Rhizobium mongolense RepID=UPI0003B36CFA similarity UNIREF
DB: UNIREF100
  • Identity: 83.2
  • Coverage: 202.0
  • Bit_score: 337
  • Evalue 9.30e-90
rrmJ2; ribosomal RNA large subunit methyltransferase J similarity KEGG
DB: KEGG
  • Identity: 77.3
  • Coverage: 211.0
  • Bit_score: 336
  • Evalue 5.00e-90

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Taxonomy

Rhizobium tropici → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 636
GATCCCTATGTGCAGCGCGCCCAGCTCGAGGGCTATCGCGCCCGCGCTGCTTTCAAGTTGCTGGAGATCGACGAGAAGCATCAGATCCTCAAAGGTGCGCGCCGGATCATCGATTTGGGTGCCGCGCCCGGAAGCTGGTCGCAGATCGCGGCCAAGGTCACCGGCTCGACGGCCGAGGACGTGCGCGTCGCCGGCATCGATTTTCTCGAAATCGCGCCGCTGCCGGGCGTCACCTTCCTTCAGATGGATTTCCTCGAGGATGAAGCGCCGGATGCGGTCATGGCAGCGCTCGGCGGCGCGCCGGATGTCGTGCTTTCCGACATGGCAGCGCCCACCACCGGCCACCAGAAGACCGACCATATCCGCACCATGCATCTGTGCGAGGTCGCGGCCCATTTTGCCGTCGACGTGCTGGTCAAGGGCGGGCACTTCCTTGCAAAGACCTTCCAGGGCGGCACCGAGCGCGAACTGCTCGACATGCTGAAGAAGAATTTCCGCCAGGTCATCCACATCAAGCCGGCCTCGTCGCGGGCGGAATCGGTGGAGATGTTCCTGCTCGCCAAGGGTTTCAAAGGCCGCGATGCGCAGGCGCCGGATGCCGAGGTGCAGGAGCCGGAACAGGCCGTGGAAGAATAG
PROTEIN sequence
Length: 212
DPYVQRAQLEGYRARAAFKLLEIDEKHQILKGARRIIDLGAAPGSWSQIAAKVTGSTAEDVRVAGIDFLEIAPLPGVTFLQMDFLEDEAPDAVMAALGGAPDVVLSDMAAPTTGHQKTDHIRTMHLCEVAAHFAVDVLVKGGHFLAKTFQGGTERELLDMLKKNFRQVIHIKPASSRAESVEMFLLAKGFKGRDAQAPDAEVQEPEQAVEE*