ggKbase home page

SCNpilot_expt_1000_bf_scaffold_8333_curated

Search features with annotation key words

Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_8333_curated_1
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..636
DNA (636bp) protein (212aa)
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547};; 23S rRNA Um2552 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; rRNA (uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
23S rRNA methyltransferase n=1 Tax=Rhizobium mongolense RepID=UPI0003B36CFA
rrmJ2; ribosomal RNA large subunit methyltransferase J
SCNpilot_expt_1000_bf_scaffold_8333_curated_2
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

677..1060
DNA (384bp) protein (128aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Sinorhizobium medicae (strain WSM419) RepID=A6U6F1_SINMW
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ABR59231.1}; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;"
SCNpilot_expt_1000_bf_scaffold_8333_curated_3
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1063..2472)
DNA (1410bp) protein (470aa)
major facilitator transporter n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI00036514EF
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:EJL51622.1}; Flags: Precursor;; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;"
MFS family permease
SCNpilot_expt_1000_bf_scaffold_8333_curated_4
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2675..3676
DNA (1002bp) protein (334aa)
Zn-dependent hydrolase, glyoxylase n=1 Tax=Rhizobium sp. CF080 RepID=J2HUT5_9RHIZ
Methyl parathion hydrolase {ECO:0000313|EMBL:CDN46503.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_8333_curated_5
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3781..4152)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CHT8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR80092.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_8333_curated_6
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4512..4610
DNA (99bp) protein (33aa)
inosine 5'-monophosphate dehydrogenase; K00088 IMP dehydrogenase [EC:1.1.1.205]
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; TaxID=707241 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti
inosine-5`-monophosphate dehydrogenase n=1 Tax=Rhizobium meliloti RepID=UPI0002EADA15
Displaying 6 items

View Taxonomy