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SCNpilot_expt_1000_bf_scaffold_1601_curated_20

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(11835..12053)

Top 3 Functional Annotations

Value Algorithm Source
Translation initiation factor IF-1 n=4 Tax=Rhizobium/Agrobacterium group RepID=B9JB05_AGRRK similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 72.0
  • Bit_score: 146
  • Evalue 8.00e-33
infA; translation initiation factor IF-1 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 72.0
  • Bit_score: 146
  • Evalue 2.50e-33
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 72.0
  • Bit_score: 146
  • Evalue 1.10e-32

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Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 219
ATGCCGAAAGAAGAAGTCCTCGAATTCCCGGGTGTCGTCACCGAACTGCTGCCCAATGCCACGTTCCGCGTCAAGCTGGAAAACGAACACGAGATCATCGCCCATACCGCCGGCCGCATGCGCAAGAACCGCATCCGCGTTCTCGCCGGCGACAAGGTTCTGGTCGAGATGACGCCCTACGACCTGACCAAGGGCCGCATCACCTATCGCTTCAAGTGA
PROTEIN sequence
Length: 73
MPKEEVLEFPGVVTELLPNATFRVKLENEHEIIAHTAGRMRKNRIRVLAGDKVLVEMTPYDLTKGRITYRFK*