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SCNpilot_expt_1000_bf_scaffold_2313_curated_16

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(12682..14121)

Top 3 Functional Annotations

Value Algorithm Source
glcD; glycolate oxidase subunit GlcD (EC:1.1.3.15); K00104 glycolate oxidase [EC:1.1.3.15] similarity KEGG
DB: KEGG
  • Identity: 86.7
  • Coverage: 473.0
  • Bit_score: 832
  • Evalue 8.50e-239
FAD/FMN-dependent dehydrogenase n=1 Tax=Rhizobium sp. CF142 RepID=J1SSJ0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 87.1
  • Coverage: 479.0
  • Bit_score: 837
  • Evalue 8.50e-240
FAD/FMN-dependent dehydrogenase {ECO:0000313|EMBL:EJJ28233.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.1
  • Coverage: 479.0
  • Bit_score: 837
  • Evalue 1.20e-239

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Taxonomy

Rhizobium sp. CF142 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1440
ATGAGCGGTTTCATTCGGTTTCTGGAGCCGCAGCCGGCCATCCTGGCGCGTCGCCGACAGATCGTCGCGGATCTCGCCGATTTGCTGGCGAAGGATGGGTTGATTCACGAGCCGCGCGAGCTGGTGCCGTTCGAGACCGACGCCTTCGTCTCCTATCGCCGTCTGCCGCTGGCCGTCGCGTTGCCGCGCACCACGGAAGAGGTGGCGGCGGTTCTGCGCTATTGCCACAAATATGCCATTCCGGTGGTGCCGCGCGGCGCGGGCACCTCGCTTTCGGGCGGCGCCATTCCGCAAGAGGATGCGGTGGTGATCGGCCTGTCGAAGATGACGCGCATCCTCGATGTGGACTTCGCCAACCGCTGCGCCACGGTGCAGGCGGGTGTCACCAATCTCAATATTTCCGAGGCGGTGATGGCGGAGGGGTTCTTCTACGCGCCGGATCCGAGTTCGCAGCTCGCCTGCACCATCGGCGGCAATATCGGCATGAATTCCGGCGGCGCCCATTGCCTGAAATACGGCGTCACCACCAACAACCTGCTCGGCGTCACTCTTGTCTTGATCGACGGCACGGTGATCGAACTCGGCGGCAAGCATCTCGATAGCGCCGGCTACGATCTTCTCGGCCTCGTCTGCGGCCATGAGGGCCAGCTCGGCATCGTCACCGAGGCGACCGTGCGCCTCATCGCCCGTCCGGAGGGCGCGCGGCCGGTGTTGTTCGGTTTCGAGACCTCGGAGGAGGCTGGTTCCTGCGTCGCCGATGTCATCGGCTCCGGCATCATCCCGGTCGCCATCGAATTCATGGACAAGCCGGCGATCGAGATCTGCGAAGCCTTCGCCAAGGCCGGCTATCCGCTCGATGTCGGCGCGCTGCTGATTGTCGAGGTCGAGGGTTCGGAGCCGGAAATGGAAGCGATGCTGTCCGGCATCGTCGAGATCGCCCGCCGCCATGGGGTGAAGACGGTGCGCGAATGCCAGTCGGCGACCGAGGCGGCGGCGATCTGGAAAGGCCGCAAATCCGCCTTCGGCGCGACGGGCCGCATCGCCGATTACATCTGCATGGACGGCACCGTGCCGCTCAGCCAGCTTTCCCATGTGCTGAAGAAGACGTCGGAGATCGTCGACCGTCTCGGCCTGCGCGTCGCCAATGTCTTCCATGCCGGCGACGGCAACATGCATCCGCTGATCCTGTTCAACGCCAACGACCCCGAAGACGCCGCCCGCGCCGAACAGGCCGGCAACGAGATCCTGAAGCTCTGCGTCGATGCCGGCGGCTGCCTGACCGGCGAGCACGGCGTCGGCATCGAAAAACGTGACCTGATGACCCATCAATACAAGAAGCCTGATCTCGACCAGCAGATGGCCGTGCGCGCCGCCTTCGATCCGCAATGGCTGCTCAATCCGTCCAAGGTGTTCCCGCTCGACGGCCGGTCGGCGGCATGA
PROTEIN sequence
Length: 480
MSGFIRFLEPQPAILARRRQIVADLADLLAKDGLIHEPRELVPFETDAFVSYRRLPLAVALPRTTEEVAAVLRYCHKYAIPVVPRGAGTSLSGGAIPQEDAVVIGLSKMTRILDVDFANRCATVQAGVTNLNISEAVMAEGFFYAPDPSSQLACTIGGNIGMNSGGAHCLKYGVTTNNLLGVTLVLIDGTVIELGGKHLDSAGYDLLGLVCGHEGQLGIVTEATVRLIARPEGARPVLFGFETSEEAGSCVADVIGSGIIPVAIEFMDKPAIEICEAFAKAGYPLDVGALLIVEVEGSEPEMEAMLSGIVEIARRHGVKTVRECQSATEAAAIWKGRKSAFGATGRIADYICMDGTVPLSQLSHVLKKTSEIVDRLGLRVANVFHAGDGNMHPLILFNANDPEDAARAEQAGNEILKLCVDAGGCLTGEHGVGIEKRDLMTHQYKKPDLDQQMAVRAAFDPQWLLNPSKVFPLDGRSAA*