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SCNpilot_expt_1000_bf_scaffold_2313_curated_23

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 19706..20443

Top 3 Functional Annotations

Value Algorithm Source
16S ribosomal RNA methyltransferase RsmE; K09761 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] similarity KEGG
DB: KEGG
  • Identity: 80.0
  • Coverage: 245.0
  • Bit_score: 401
  • Evalue 2.50e-109
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter (strain K84 / ATCC BAA-868).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.0
  • Coverage: 245.0
  • Bit_score: 401
  • Evalue 1.10e-108
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9J9V8_AGRRK similarity UNIREF
DB: UNIREF100
  • Identity: 80.0
  • Coverage: 245.0
  • Bit_score: 401
  • Evalue 7.90e-109

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 738
ATGCGTGCCAACTTCAGAATGCAGCGGCTTCATGTCGAGACGGACCTGCGCAAGGACGCGCCGGTCGAGGCCGACAAGGAGCAGTTCCACTATCTCGCCAATGTGCTGCGCGCCGAAGCCGGACAGGACGTGCTGCTGTTCAACGGCCGCGACGGTGAGTGGATCGCCAGGCTCGCCTTCCCGACCCGCAAGCGTATCGAGATGACCCCGGTCGAACTGGCCCGCCCGCAGCCGCAGCCATCCGACCTGCATTATCTCTTCGCGCCGCTGAAGGTCGGGCGGCTGGATTATCTGGTGCAGAAGGCCGTGGAAATGGGCGCCGGCCTGCTGCAGCCGGTGATGACCCAGCATGTGCAGGGCAAGATCACCAGCCTGGACCGGCTAGAGGCGAATGTGATCGAGGCGGCAGAGCAATGCGGCATCCTGTCGATTCCGCGCGTCGCCGCTCCCGTCAAGCTGCGCGACCTGCTCGACAGCTGGCCGCAGGACCGGCGCATCATCTATTGCGACGAGGGCGATGCCGGGCAGAACCCGCTGCCGGTGCTGGCAAACGTCAAGGAGCGCAAGCTGGCATTGCTGATCGGGCCGGAAGGCGGCTTTTCCGAGGAGGAGAGGCAATGGCTTCGCAGCCTCGATTTCGTCACCGCCATTCCGCTGGGGCCGCGCATCCTGCGCGCCGATACCGCCGCGGTCGCCGCCATGGCCGTGGTGCAGGCCGCCATTGGCGACTGGCGCTAG
PROTEIN sequence
Length: 246
MRANFRMQRLHVETDLRKDAPVEADKEQFHYLANVLRAEAGQDVLLFNGRDGEWIARLAFPTRKRIEMTPVELARPQPQPSDLHYLFAPLKVGRLDYLVQKAVEMGAGLLQPVMTQHVQGKITSLDRLEANVIEAAEQCGILSIPRVAAPVKLRDLLDSWPQDRRIIYCDEGDAGQNPLPVLANVKERKLALLIGPEGGFSEEERQWLRSLDFVTAIPLGPRILRADTAAVAAMAVVQAAIGDWR*