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SCNpilot_expt_1000_bf_scaffold_2313_curated_27

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 23600..23701

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=2 Tax=Agrobacterium RepID=F0L6T3_AGRSH similarity UNIREF
DB: UNIREF100
  • Identity: 97.1
  • Coverage: 34.0
  • Bit_score: 66
  • Evalue 4.90e-09
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 97.1
  • Coverage: 34.0
  • Bit_score: 66
  • Evalue 1.50e-09
Transcriptional regulator, LysR family protein {ECO:0000313|EMBL:EHJ98437.1}; TaxID=1107544 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens 5A.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.1
  • Coverage: 34.0
  • Bit_score: 66
  • Evalue 6.90e-09

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 102
ATGTCCGCCCCGCTCGATATCGACCAACTGCAAACCTTCATCGCCATCGTCGATACCGGCAGTTTCACCAAGGCCGCCGAACGGGTGTTCAAGACGCAATCG
PROTEIN sequence
Length: 34
MSAPLDIDQLQTFIAIVDTGSFTKAAERVFKTQS