ggKbase home page

SCNpilot_expt_1000_bf_scaffold_2645_curated_16

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(15070..15321)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal protein S21 n=1 Tax=uncultured organism RepID=T1W9Y9_9ZZZZ similarity UNIREF
DB: UNIREF100
  • Identity: 85.2
  • Coverage: 81.0
  • Bit_score: 139
  • Evalue 1.50e-30
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.3
  • Coverage: 79.0
  • Bit_score: 139
  • Evalue 1.60e-30
30S ribosomal protein S21 similarity KEGG
DB: KEGG
  • Identity: 85.2
  • Coverage: 81.0
  • Bit_score: 136
  • Evalue 3.00e-30

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 252
ATGTTTTTGCAAGTTCTGGTCAGGGACAACAATGTCGATCAAGCTCTTCGCGTTCTGAAAAAGAAGATGCAGAGAGAAGGGCTTTTCCGGGAAATGAAGGCCCGCAACGCCTATGAAAAGCCTTCCGAAAAGAGGGTTCGCGAAAAAGCCGAGGCCATCAGACGCACCCGCAAGCTGGCTCGAAAGAAAGCACAGCGCGAAGGGCTTCTCCCCGCCCCGAAGAAGAAGCAGGTTCTGGCCCGGACCAGATAA
PROTEIN sequence
Length: 84
MFLQVLVRDNNVDQALRVLKKKMQREGLFREMKARNAYEKPSEKRVREKAEAIRRTRKLARKKAQREGLLPAPKKKQVLARTR*