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SCNpilot_expt_1000_bf_scaffold_2645_curated_20

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(16888..17970)

Top 3 Functional Annotations

Value Algorithm Source
phaZ1; poly(3-hydroxyalkanoate) depolymerase C (EC:3.1.1.-) similarity KEGG
DB: KEGG
  • Identity: 64.8
  • Coverage: 366.0
  • Bit_score: 475
  • Evalue 1.50e-131
Poly(3-hydroxyalkanoate) depolymerase C {ECO:0000313|EMBL:AFL50252.1}; EC=3.1.1.- {ECO:0000313|EMBL:AFL50252.1};; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.8
  • Coverage: 366.0
  • Bit_score: 475
  • Evalue 6.80e-131
Poly(3-hydroxyalkanoate) depolymerase C n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X2Z6_RHIFR similarity UNIREF
DB: UNIREF100
  • Identity: 64.8
  • Coverage: 366.0
  • Bit_score: 475
  • Evalue 4.90e-131

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Taxonomy

Sinorhizobium fredii → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1083
ATGAGATCCTTATCCGATACAGTCGAGCGCCTCACCCGGATGCGTTCGATAAAGCCCGGCGCGCCCTCCGGTTCGCGCCTGCAAAAGCTGGAGGGCTTCGGAAGCAACCCCGGGGCCTTGGGCGCCTGGTATCATATGCCGGACCAGTTGCCGGAAACGCCAGCCCTGGTGGTGGTGCTTCATGGCTGCACGCAGACGGCGGCAGGCTATGACAACGGCTCCGGCTGGTCCGCATTGGCGGACGACTACGGCTTCGCCGTTCTCTTTCCGGAACAGGTCCGCGCCAATAACCCAAATCTGTGTTTCAACTGGTTCAACCCCGGCGATACGCGCCGGGACCAGGGTGAGGTCATGTCCATTCGGCAGATGATCGCTGCCATGGTATCGCGATGCGGTATCGATAAGCGTCGGATTCATATCACCGGATTGTCGGCGGGCGGAGCAATGGCCAACGCCATGCTGGCCTGCTATCCGGATGTCTTCGCGGGCGGAGCCATCATTGCCGGTCTTCCCCATGCCATAGCGTCGACCGTCCCGGAAGCGTTCGACCGGATGCGCGGCCACGGACTACCGGACACCGATAGCTTGCAGGCCAGCCTGCGGGCCGCATCTCGGCATGACGGGCCATGGCCGGCGGTTTCCGTCTGGCACGGCACGAGCGACAAGACAGTGGTTCCGGAAAATGCCGCGGCGATTGTCGCGCAATGGCGAGGTGTGCATGCGCTTTCGGATCATCCCGACTCCTCCGGGATAATCGACCGGCATTCGCGATCGGTCTGGCGGGATGCGAACGGCGCGGATGCCATCGAGCTTCATCTGATCACGGACATGGGGCATGGAACACCGATCGACACAGCCTCCGGCTATGGCGGAAGAGCCCCGTTTATGCTTGACATCGGCATTTCCTCCACCGAGCAGATTGCGCGGTCCTGGGGCCTGACCGCATCGTTCGAGCGCCTTCCCAAAATGGCTCCTGCGTCGCAGGGCGCGAATACCGGTCCGGCATCGGCAAGCGACTGGGACGGCAACAAAATTCAATCGGTCATCGAAAGCGCATTGCGGTCGGCCGGGCTCATGAAATGA
PROTEIN sequence
Length: 361
MRSLSDTVERLTRMRSIKPGAPSGSRLQKLEGFGSNPGALGAWYHMPDQLPETPALVVVLHGCTQTAAGYDNGSGWSALADDYGFAVLFPEQVRANNPNLCFNWFNPGDTRRDQGEVMSIRQMIAAMVSRCGIDKRRIHITGLSAGGAMANAMLACYPDVFAGGAIIAGLPHAIASTVPEAFDRMRGHGLPDTDSLQASLRAASRHDGPWPAVSVWHGTSDKTVVPENAAAIVAQWRGVHALSDHPDSSGIIDRHSRSVWRDANGADAIELHLITDMGHGTPIDTASGYGGRAPFMLDIGISSTEQIARSWGLTASFERLPKMAPASQGANTGPASASDWDGNKIQSVIESALRSAGLMK*