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SCNpilot_expt_1000_bf_scaffold_2645_curated_25

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(21714..22877)

Top 3 Functional Annotations

Value Algorithm Source
Integrase/recombinase XerD n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CM93_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 85.8
  • Coverage: 379.0
  • Bit_score: 643
  • Evalue 1.90e-181
Integrase/recombinase xerD {ECO:0000313|EMBL:EYR81582.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.8
  • Coverage: 346.0
  • Bit_score: 600
  • Evalue 1.50e-168
putative phage integrase similarity KEGG
DB: KEGG
  • Identity: 76.1
  • Coverage: 385.0
  • Bit_score: 578
  • Evalue 1.80e-162

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1164
ATGTCCGATAAGTTTGCATTATCGTTCATTATGCTCTTTATAGAGAGAATGGCCCGAATCGTCGACGAAAACACCGAATTTGCCCCTCAGGACAGCTCCGCGCCGCCGCTCAGCACACCGGCGGCCGGCGGTATTTCCATCGCCGTCGCCGCGGTCTCCGAAACTCCTCCCCTACCGGCCCAGTTGCAGGATCTCGCCGAACGCGCCCGCGGCTACGTCGAGGCCGCCAGTTCGGCCAACACGCGAAAGGCCTATGCCTCCGACTGGAAACACTTTTCCGCCTGGTGCCGGCGGCAGAACCTTTCCCCCCTCCCCTCGGATCCGCACGTTGTCGGCCTCTACATCACGGCCTGCGCGTCCGGTTCAGCAGAGCGTGGCAGCAAGCCTAACAGCGTCTCGACCATCGAGCGCCGTCTTGCCGCCCTCGGCTGGAACTATGCCCAGCGCGGCGAGCAAAAACTCGATCGCAAGGACCGCGCCATCGCCACCGTGATGGCCGGCATCCGCAACCGGCACGCCGCTCCGCCCCGGCAAAAGGAAGCCATCCTGCCGGAAGACCTGATCGCCATGCTGGAAGTCCTCGACAGAGGGACGCTGCGCGGCATCAGGGACCGCGCGATGCTGCTCGTCGGTTTCGCGGGTGGCTTGCGCCGCTCCGAAATCACAGGCCTCGACCTCGGCCGTGACCAGACAGACGACGGCCGCGGCTGGATCGAGATCTTCGACAAGGGCGCGCTCGTGACGCTGCGCGGGAAAACCGGTTGGCGCGAGGTGGAGATCGGCCGCGGCTCCTCGGACGCCACCTGCCCCGTCGCCGCGCTCGAAAACTGGATCAAGTTCGCGAAGCTCGCAAAAGGCCCCCTCTTCCGCCGGGTCACCGGCCAGGGCAAGAACGTCGGGCCGGATCGGCTGAACGACCAGGAGGTCGCGCGCCTCGTCAAGAAGACAGCGCTCGCCGCCGGCGTGCGCGGCGATCTGTCCGAGGCCAAGCGCGGGCAAAAATTCGCCGGCCACTCGCTGCGCGCCGGTCTTGCCTCCTCAGCCGAGGTCGACGAACGGTATGTCCAGAAGCAACTCGGTCACAGCAGCGCCGAAATGACTCGCCGCTACCAGCGCCGACGCGACCGGTTCCGCATCAACCTCACCAAAGCTGCGGGTCTTTGA
PROTEIN sequence
Length: 388
MSDKFALSFIMLFIERMARIVDENTEFAPQDSSAPPLSTPAAGGISIAVAAVSETPPLPAQLQDLAERARGYVEAASSANTRKAYASDWKHFSAWCRRQNLSPLPSDPHVVGLYITACASGSAERGSKPNSVSTIERRLAALGWNYAQRGEQKLDRKDRAIATVMAGIRNRHAAPPRQKEAILPEDLIAMLEVLDRGTLRGIRDRAMLLVGFAGGLRRSEITGLDLGRDQTDDGRGWIEIFDKGALVTLRGKTGWREVEIGRGSSDATCPVAALENWIKFAKLAKGPLFRRVTGQGKNVGPDRLNDQEVARLVKKTALAAGVRGDLSEAKRGQKFAGHSLRAGLASSAEVDERYVQKQLGHSSAEMTRRYQRRRDRFRINLTKAAGL*