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SCNpilot_expt_1000_bf_scaffold_6970_curated_3

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 1758..2039

Top 3 Functional Annotations

Value Algorithm Source
TRAP transporter, DctM subunit n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HMJ2_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 58.1
  • Coverage: 93.0
  • Bit_score: 129
  • Evalue 2.20e-27
C4-dicarboxylate ABC transporter permease {ECO:0000313|EMBL:KGJ01416.1}; Flags: Fragment;; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.1
  • Coverage: 92.0
  • Bit_score: 133
  • Evalue 2.20e-28
TRAP dicarboxylate transporter subunit DctM similarity KEGG
DB: KEGG
  • Identity: 57.6
  • Coverage: 92.0
  • Bit_score: 126
  • Evalue 5.90e-27

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Taxonomy

Paracoccus versutus → Paracoccus → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 282
ATGGCGACCCTGGTGCTGTCGGTGCCGGTGGTTGCGCCGCTCCTGAAATCGCTCGGCTTCGACCTCGTCTGGTTCGGCGTCATCAAGATCGTCGCCGCCGAAATCGGCCTGGTGACGCCGCCCTTGGGACTGAACTGCTTCGTCGTCGCCAAATATGCGAAAGTGCCGGCCGGCGAAATCTTCCGCGGCGTCTTCCCGCGTGTGGTCTCGCATTTTCTCGCAGTGTTGATCCCGCTGGTCTTCCTCCCGCTCAGCCTCTGGCTGCCGGACCATCTGAACTGA
PROTEIN sequence
Length: 94
MATLVLSVPVVAPLLKSLGFDLVWFGVIKIVAAEIGLVTPPLGLNCFVVAKYAKVPAGEIFRGVFPRVVSHFLAVLIPLVFLPLSLWLPDHLN*