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SCNpilot_expt_1000_bf_scaffold_1689_curated_14

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 12872..13840

Top 3 Functional Annotations

Value Algorithm Source
Glycine betaine/proline ABC transporter, periplasmic substrate-binding protein n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CV73_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 44.5
  • Coverage: 317.0
  • Bit_score: 284
  • Evalue 1.40e-73
Glycine betaine/proline ABC transporter, periplasmic substrate-binding protein {ECO:0000313|EMBL:CDX36413.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.8
  • Coverage: 317.0
  • Bit_score: 370
  • Evalue 2.10e-99
proX; glycine betaine-binding periplasmic protein similarity KEGG
DB: KEGG
  • Identity: 38.8
  • Coverage: 317.0
  • Bit_score: 249
  • Evalue 1.60e-63

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Taxonomy

Mesorhizobium sp. SOD10 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 969
ATGCACACAGCTCTGAAAACCCTTCTCGCGGCCTCCGCCGCGCTCGCCGCCTTCTTTCCGGTGCTTGCGCAGCCCAATCCCATCACCATCGCCGATCCCGGCTACGCCACCGCGCAGGGCACCGCCTCTGTCGTGAAGGTGCTGCTCGAGGAGCAGCTCGGCAAGCAGGTCGAGACCGTGAAGGCCGGATCGGTTCCGGTTATCTGGGAGGCGCTCAACCGCAACGGCGGCGAAATCGACATCTGGACGGACGTCTGGCTGCCGAACCAGCAGGCGCTCGTCGATCAATATGCCGGCGAAGGCGGCAAGGTGAAACTTGCGGCCAATTCCTATGCCGGCACGCAGGGCTACTGCACCACCAAGGCGATCGCGGACAAACACGACATCCATTCCGTGTTCGATCTCTCGGATCCCGCAAAGGCCGCCGTCTTTTCGGCCGACGGCAAGGGCAAAGGCAGGATCTGGATCGGTGCGGCCGGCTGGCTGTCGACGAACATCGAGACGGTGCGCGCCCGCGACTACGGTTTTGCAGATTTCTTCGACCTGCAGACGACGGACGAGGCTGTCGCGACCGCCGATCTCGATGCCGCCGTCAAGGCCGGCGCCGGCTGGATCGGCTATTGCTACGGTCCGCACCAGAATTTCGCGCGCTACCAACTCGAAGTTCTGGAAGAGCCCCCGCATGACGATGCGGCCTGGACCTTCGTCGAGCCTTCCGACCCGAACTGGCTGGAGAAATCGTCGATCAAGTCCGCCTATAAGGACGCCGCGATTCACATTGCTTACTCCAAATCGCTGGCGGACAGCGCGCCGGAGGTGGCAGCCATCCTCGAAAAGGTGACGTTCACGACCGACGCCGTCAGCAAGCTCGCCTATGCGATCGCGGTCGAAGGCAAGACCCCCGATGACGCCGCGAAGGAATGGGTTGCCGCCAATCCCGATCTCGTTGCCGGCTGGATCGGAAACTGA
PROTEIN sequence
Length: 323
MHTALKTLLAASAALAAFFPVLAQPNPITIADPGYATAQGTASVVKVLLEEQLGKQVETVKAGSVPVIWEALNRNGGEIDIWTDVWLPNQQALVDQYAGEGGKVKLAANSYAGTQGYCTTKAIADKHDIHSVFDLSDPAKAAVFSADGKGKGRIWIGAAGWLSTNIETVRARDYGFADFFDLQTTDEAVATADLDAAVKAGAGWIGYCYGPHQNFARYQLEVLEEPPHDDAAWTFVEPSDPNWLEKSSIKSAYKDAAIHIAYSKSLADSAPEVAAILEKVTFTTDAVSKLAYAIAVEGKTPDDAAKEWVAANPDLVAGWIGN*