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SCNpilot_cont_500_bf_scaffold_4744_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_4744_curated_1
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..298
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QPN2_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE61815.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_4744_curated_2
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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314..1492
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V478_9BRAD
FtsX-like permease family protein {ECO:0000313|EMBL:CEG10041.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hypothetical protein; K02004 putative ABC transport system permease protein
SCNpilot_cont_500_bf_scaffold_4744_curated_3
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1841..2257
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NLE7_AFIFE
Nickel transporter {ECO:0000313|EMBL:KJC51691.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
hypothetical protein; K08970 nickel/cobalt exporter
SCNpilot_cont_500_bf_scaffold_4744_curated_4
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2508..2828
DNA (321bp) protein (107aa)
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
SCNpilot_cont_500_bf_scaffold_4744_curated_5
Methylomicrobium album, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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3696..4040
DNA (345bp) protein (115aa)
Arabinose efflux permease family protein n=1 Tax=Methylomicrobium album BG8 RepID=H8GR35_METAL
Arabinose efflux permease family protein {ECO:0000313|EMBL:EIC29862.1}; TaxID=686340 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicrobium album BG8.;"
major facilitator superfamily protein
SCNpilot_cont_500_bf_scaffold_4744_curated_6
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4046..4750)
DNA (705bp) protein (235aa)
Cytochrome c class I n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4M3_9BRAD
Cytochrome c class I {ECO:0000313|EMBL:EFI52903.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
cytochrome c, class I; K08738 cytochrome c
SCNpilot_cont_500_bf_scaffold_4744_curated_7
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4747..4881)
DNA (135bp) protein (45aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4M4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI52904.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
SCNpilot_cont_500_bf_scaffold_4744_curated_8
unknown

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comp(4890..5117)
DNA (228bp) protein (76aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_4744_curated_9
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5191..6129)
DNA (939bp) protein (313aa)
Putative copper resistance protein D n=2 Tax=Oligotropha carboxidovorans RepID=F8BJG0_OLICM
Bradyrhizobium elkanii strain UASWS1015 Contig152, whole genome shotgun sequence {ECO:0000313|EMBL:KIU52999.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
putative copper resistance protein D; K07245 putative copper resistance protein D
SCNpilot_cont_500_bf_scaffold_4744_curated_10
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6129..6530)
DNA (402bp) protein (134aa)
Copper resistance protein C n=2 Tax=Oligotropha carboxidovorans RepID=F8BQY2_OLICM
copper resistance protein C; K07156
Copper resistance protein C {ECO:0000313|EMBL:AEI08226.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_cont_500_bf_scaffold_4744_curated_11
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6605..6910)
DNA (306bp) protein (102aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4N5_9BRAD
Periplasmic copper-binding protein {ECO:0000313|EMBL:CEG06633.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_4744_curated_12
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7265..7747)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NIU9_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS28384.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
copper tolerance protein
SCNpilot_cont_500_bf_scaffold_4744_curated_13
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7796..8323)
DNA (528bp) protein (176aa)
Multicopper oxidase type 3 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4N8_9BRAD
Multicopper oxidase type 3 {ECO:0000313|EMBL:EFI52918.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
twin-arginine translocation pathway signal
Displaying 13 items

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