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SCNpilot_cont_500_bf_scaffold_482_curated_4

Organism: scnpilot_dereplicated_Rhizobiales_7

near complete RP 53 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(2726..3307)

Top 3 Functional Annotations

Value Algorithm Source
Cold shock protein CspB n=1 Tax=Rhodovulum sp. PH10 RepID=J5PCZ1_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 84.1
  • Coverage: 176.0
  • Bit_score: 321
  • Evalue 4.80e-85
Cold shock protein CspB {ECO:0000313|EMBL:EJW09867.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.1
  • Coverage: 176.0
  • Bit_score: 321
  • Evalue 6.80e-85
cold-shock DNA-binding domain-containing protein; K03704 cold shock protein (beta-ribbon, CspA family) similarity KEGG
DB: KEGG
  • Identity: 75.7
  • Coverage: 189.0
  • Bit_score: 299
  • Evalue 1.10e-78

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Taxonomy

Rhodovulum sp. PH10 → Rhodovulum → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 582
ATGCCAGGCACACGCCTCGGTCTCGGCCCGGAAGTTGATCATCATCTTGATGACGAAGCCGGCGCGAGCATCATTGAAATCAGCGGCTCCATTAAATGGTTCGATGTCGCCAAGGGTTTCGGCTTCATCATCCCTGACAATGGACTGCCCGACGTCCTTCTTCATGTGACCTGTCTGCGCCGCGATGGCTTCCAGACGGCATATGAAGGCGCCCGCGTCGTCTGCGAGGTGTTGCAGCGGCCGCGCGGTCTGCAGGCCCTGCGGGTTGTCTCGATGGACGAGAGCACGGCGATCCACCCGGCGCAGATGCCGCCGCCGCGCACCCACGTCTCGGTGACGCCGACCAGCGGTCTCGAACGCGCCCAGGTCAAGTGGTTCAACCGGCTGCGGGGCTTCGGCTTCCTGACCCGCGGCGAGGGGACGCCGGACATCTTCGTCCATATGGAAACCTTGCGCCGCTACGGCCTCGCCGAACTGCGGCCCGGTCAGACGGTGCTGGTCCGTTTTGGGCCCGGACCCAAGGGGATGATGGCCGCCGAGGTCCGCCCGGATGGCGGGTCGCTCGGACCGGCGTCGCACTGA
PROTEIN sequence
Length: 194
MPGTRLGLGPEVDHHLDDEAGASIIEISGSIKWFDVAKGFGFIIPDNGLPDVLLHVTCLRRDGFQTAYEGARVVCEVLQRPRGLQALRVVSMDESTAIHPAQMPPPRTHVSVTPTSGLERAQVKWFNRLRGFGFLTRGEGTPDIFVHMETLRRYGLAELRPGQTVLVRFGPGPKGMMAAEVRPDGGSLGPASH*