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SCNpilot_cont_500_bf_scaffold_482_curated_17

Organism: scnpilot_dereplicated_Rhizobiales_7

near complete RP 53 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 15634..16428

Top 3 Functional Annotations

Value Algorithm Source
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component n=1 Tax=Rhizobium sp. CF080 RepID=J3BBD4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 61.9
  • Coverage: 236.0
  • Bit_score: 288
  • Evalue 8.10e-75
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:EUB99158.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.9
  • Coverage: 236.0
  • Bit_score: 288
  • Evalue 1.10e-74
tauC; taurine uptake ABC transporter; K02050 NitT/TauT family transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 51.4
  • Coverage: 257.0
  • Bit_score: 255
  • Evalue 1.80e-65

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Taxonomy

Rhizobium sp. CF080 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 795
ATGGCTGCGACCGGCTCACTGACCGCGAGCGCGCCGGTGCGCGGCCGGCCCAACCGCGTCACGCTGCTGCGGATCGGCATCATCGTCGCGGTGCTGGCAGGCTGGGAGCTGCTCTCGCGCTCGGGCTGGCTCTACCGCGACGTGGTGCCCTCGCTGTTCGCGATCGGCAAGGCAATCGTCGCGCTGTTGTCGAGCGGCGAATATTATTTTCACCTCGGCGTCACCGCCGGCGAAATCCTCGCCGCGCTGGCGATCGGCGGCGTGCTCGGTCTGATCGTCGGACTGCTGCTCGGCGGCAACCGGTTTCTCGCCGCAGCGTTCGAATCCTATCTCTATTATCTCGGCCCCACGCCAAAGATCATCTTCTTCCCGATCCTGATCATGTGGTTCGGCGTCGGTCCCGGCTCGAAGATCGCGATGGGCGTGCTATCGGCGTTCTTCCCGATCGCGCTGTCGGTCGCCGCCGGCATGCGCGAGATCGACCGCGTGCTGATCCGCGTCGGCAAGAGCTTCCGCGCCACGACCTGGCAGATGGCGACGAAGATTTACGTCCCGGCAATGCGCCATCCGATCATCAACGGCGTGCGGCTCGGTCTCGGCGTCGGCCTGATCGGCACCCTGCTCGCGGAAACCAAGCTGTCGAACAAGGGGATCGGCTATCTGATCATCCAGGCTTACACCTTGTTCGACATGCCGCGCATGTACGCGATGCTGATCGTGCTGTTCGTGCTGGCAATCGGCGCCAATGCACTGGTCGGCCGGCTCGGCGGTTTGAGCAACATCAAGCGGCGGTAG
PROTEIN sequence
Length: 265
MAATGSLTASAPVRGRPNRVTLLRIGIIVAVLAGWELLSRSGWLYRDVVPSLFAIGKAIVALLSSGEYYFHLGVTAGEILAALAIGGVLGLIVGLLLGGNRFLAAAFESYLYYLGPTPKIIFFPILIMWFGVGPGSKIAMGVLSAFFPIALSVAAGMREIDRVLIRVGKSFRATTWQMATKIYVPAMRHPIINGVRLGLGVGLIGTLLAETKLSNKGIGYLIIQAYTLFDMPRMYAMLIVLFVLAIGANALVGRLGGLSNIKRR*