ggKbase home page

SCNpilot_cont_500_bf_scaffold_482_curated_102

Organism: scnpilot_dereplicated_Rhizobiales_7

near complete RP 53 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(83955..84575)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L4 n=2 Tax=Rhodopseudomonas palustris RepID=RL4_RHOPA similarity UNIREF
DB: UNIREF100
  • Identity: 77.2
  • Coverage: 206.0
  • Bit_score: 318
  • Evalue 5.70e-84
  • rbh
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.7
  • Coverage: 206.0
  • Bit_score: 323
  • Evalue 1.90e-85
rplD; 50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 similarity KEGG
DB: KEGG
  • Identity: 77.2
  • Coverage: 206.0
  • Bit_score: 318
  • Evalue 1.80e-84
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 621
ATGGAACTCAAGGTTCTCGCCCTCGATGGCAAGGAAGCGGGCAAGGTCACGCTCTCGAAGGAAATCTTCGGGCTCGAGCCGCGCGCCGACCTGATCCAGCGCTGCATCAACTGGCAGCTGGCGCGTCGCCAAGCCGGCACGCACAAGACCAAGGACCGGGGCGAAGTCGCGCGCACCGGCAAGAAGATGTACGGCCAGAAGGGCACCGGTGGCGCCCGTCACGGCTCGCAGCGCGTCAACCTGTTCCGCGGCGGCGGCCGTTCGTTCGGTCCGGTCGTGCGTAGCCATGCGACCGATCTGCCGAAGAAGGTGCGCGCGCTGGCGCTGCGTCACGCGCTGTCGGCCAAGGCGAAGGATGGCGGTCTCGTTATCATCGACAAGGCCTCGGTCAACGAGGGCAAGACCAAGCTGCTCGCCGGTCACTTCGGCAAGCTCGGTTGGTCGAACGCGCTGATCGTCGACGGCCAGGAGATCGAACAAAACTTCGGCCGCGCGGCGCGCAACATCCCGAACATCGACGTGCTGCCGGTGCAGGGCATCAATGTCTACGACATCCTGCGTCGCAAGACGCTGGTGCTCACCAAGGCCGCGCTCGACGCGCTGGAGGCGCGCTTCAAATGA
PROTEIN sequence
Length: 207
MELKVLALDGKEAGKVTLSKEIFGLEPRADLIQRCINWQLARRQAGTHKTKDRGEVARTGKKMYGQKGTGGARHGSQRVNLFRGGGRSFGPVVRSHATDLPKKVRALALRHALSAKAKDGGLVIIDKASVNEGKTKLLAGHFGKLGWSNALIVDGQEIEQNFGRAARNIPNIDVLPVQGINVYDILRRKTLVLTKAALDALEARFK*