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SCNpilot_cont_300_bf_scaffold_1868_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1868_curated_1
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..736
DNA (735bp) protein (245aa)
Putative dehydrogenase, with NAD binding domain {ECO:0000313|EMBL:CCD02057.1}; EC=1.1.1.- {ECO:0000313|EMBL:CCD02057.1};; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
Putative dehydrogenase, with NAD binding domain n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AVU8_AZOBR
putative dehydrogenase, with NAD binding domain
SCNpilot_cont_300_bf_scaffold_1868_curated_2
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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763..1437
DNA (675bp) protein (225aa)
4-carboxy-4-hydroxy-2-oxoadipate aldolase n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AVV2_AZOBR
4-hydroxy-4-methyl-2-oxoglutarate aldolase {ECO:0000313|EMBL:AIB15331.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
ligK; 4-carboxy-4-hydroxy-2-oxoadipate aldolase
SCNpilot_cont_300_bf_scaffold_1868_curated_3
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1470..2660
DNA (1191bp) protein (397aa)
Mandelate racemase/muconate lactonizing enzyme-like protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11AM8_MESSB
mandelate racemase/muconate lactonizing-like protein
Mandelate racemase/muconate lactonizing enzyme-like protein {ECO:0000313|EMBL:ABG65547.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCNpilot_cont_300_bf_scaffold_1868_curated_4
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2688..3335
DNA (648bp) protein (216aa)
4-carboxy-4-hydroxy-2-oxoadipate aldolase n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AVV2_AZOBR
4-hydroxy-4-methyl-2-oxoglutarate aldolase {ECO:0000313|EMBL:AIB15331.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
ligK; 4-carboxy-4-hydroxy-2-oxoadipate aldolase
SCNpilot_cont_300_bf_scaffold_1868_curated_5
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3374..3769
DNA (396bp) protein (132aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
alkylhydroperoxidase n=1 Tax=Variovorax paradoxus RepID=UPI0003664627
alkylhydroperoxidase like protein
SCNpilot_cont_300_bf_scaffold_1868_curated_6
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3788..5179
DNA (1392bp) protein (464aa)
FAD/FMN-dependent dehydrogenase n=1 Tax=Rhizobium sp. CF080 RepID=J3CFC4_9RHIZ
Lactate dehydrogenase {ECO:0000313|EMBL:KGE02387.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
putative D-lactate dehydrogenase
SCNpilot_cont_300_bf_scaffold_1868_curated_7
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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5195..7513
DNA (2319bp) protein (773aa)
molybdopterin oxidoreductase; K07812 trimethylamine-N-oxide reductase (cytochrome c) 2 [EC:1.7.2.3]
Biotin sulfoxide reductase n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A0V3_9PROT
Biotin sulfoxide reductase {ECO:0000313|EMBL:EHM00835.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
SCNpilot_cont_300_bf_scaffold_1868_curated_8
bacterium YEK0313, Bacteria

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comp(7586..7888)
DNA (303bp) protein (101aa)
Twin-arginine translocation pathway signal n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A920_STAND
Putative quorum-quenching lactonase YtnP {ECO:0000313|EMBL:CEJ12690.1}; Flags: Precursor;; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
twin-arginine translocation pathway signal
SCNpilot_cont_300_bf_scaffold_1868_curated_9
unknown

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8111..8719
DNA (609bp) protein (203aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1868_curated_10
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8647..9921)
DNA (1275bp) protein (425aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI000372E426
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:CDX12178.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
ECF subfamily RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily rbh
SCNpilot_cont_300_bf_scaffold_1868_curated_11
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9918..10103)
DNA (186bp) protein (62aa)
YCII-related protein n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VFB2_RHOPX
hypothetical protein
YCII-related protein {ECO:0000313|EMBL:ADU42900.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
Displaying 11 items

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