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SCNpilot_cont_300_bf_scaffold_282_curated

Search features with annotation key words

Displaying items 1-30 of 86 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_282_curated_1
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..1189
DNA (1188bp) protein (396aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI000370FFC1
outer membrane autotransporter barrel domain-containing protein
Outer membrane autotransporter barrel domain protein {ECO:0000313|EMBL:ACK50841.1}; Flags: Precursor;; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
SCNpilot_cont_300_bf_scaffold_282_curated_2
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1368..1772
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI00035EB722
invasion associated locus B family protein
Invasion associated locus B family protein {ECO:0000313|EMBL:ADJ24705.1}; Flags: Precursor;; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
SCNpilot_cont_300_bf_scaffold_282_curated_3
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

1882..2985
DNA (1104bp) protein (368aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002ED317E
Putative uncharacterized protein {ECO:0000313|EMBL:EDX71987.1}; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;" source="Coleofasciculus chthonoplastes PCC 7420.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_282_curated_4
unknown

Not on your lists

3003..3401
DNA (399bp) protein (133aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_282_curated_5
Tetrahymena thermophila, Tetrahymena, Hymenostomatida, Oligohymenophorea, Eukaryota

Not on your lists

3486..6206
DNA (2721bp) protein (907aa)
p200 (Fragment) n=1 Tax=Babesia bovis RepID=B8XR78_BABBO
Uncharacterized protein {ECO:0000313|EMBL:EAR89412.1}; TaxID=312017 species="Eukaryota; Alveolata; Ciliophora; Intramacronucleata; Oligohymenophorea; Hymenostomatida; Tetrahymenina; Tetrahymenidae; Tetrahymena.;" source="Tetrahymena thermophila (strain SB210).;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_282_curated_6
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6196..7173)
DNA (978bp) protein (326aa)
Negative regulator of beta-lactamase expression n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WPS7_9BURK
Negative regulator of beta-lactamase expression {ECO:0000313|EMBL:EHR72075.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
SCNpilot_cont_300_bf_scaffold_282_curated_7
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7258..9279)
DNA (2022bp) protein (674aa)
ATPase AAA n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E3CB4B
Type VI secretion ATPase, SciG/VasG/ClpV family {ECO:0000313|EMBL:AHY53446.1}; TaxID=476282 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum SEMIA 5079.;"
type VI secretion ATPase, ClpV1 family; K11907 type VI secretion system protein VasG
SCNpilot_cont_300_bf_scaffold_282_curated_8
unknown

Not on your lists

9514..9888
DNA (375bp) protein (125aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_282_curated_9
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9910..10902)
DNA (993bp) protein (331aa)
Type VI secretion protein, VC_A0111 family n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IIA9_METNO
type VI secretion protein; K11895 type VI secretion system protein ImpH
Type VI secretion protein, VC_A0111 family {ECO:0000313|EMBL:ACL57978.1}; Flags: Precursor;; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
SCNpilot_cont_300_bf_scaffold_282_curated_10
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10866..12818)
DNA (1953bp) protein (651aa)
type VI secretion protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00036B3E11
Type VI secretion protein {ECO:0000313|EMBL:KGT75427.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
hypothetical protein; K11896 type VI secretion system protein ImpG
SCNpilot_cont_300_bf_scaffold_282_curated_11
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12931..13476)
DNA (546bp) protein (182aa)
Bll3591 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89P92_BRADU
hypothetical protein; K11897 type VI secretion system protein ImpF
Bll3591 protein {ECO:0000313|EMBL:BAC48856.1}; TaxID=224911 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC; 14792 / USDA 110).;"
SCNpilot_cont_300_bf_scaffold_282_curated_12
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(13567..14055)
DNA (489bp) protein (163aa)
Hemolysin-coregulated protein (Uncharacterized) n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=H1NA93_SINAD
hemolysin-coregulated protein
Hemolysin-coregulated protein (Uncharacterized) {ECO:0000313|EMBL:AGA26720.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCNpilot_cont_300_bf_scaffold_282_curated_13
bacterium YEK0313, Bacteria

Not on your lists

comp(14179..15669)
DNA (1491bp) protein (497aa)
EvpB family type VI secretion protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E38992
Uncharacterized protein {ECO:0000313|EMBL:CEJ14873.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
type VI secretion protein EvpB; K11900 type VI secretion system protein ImpC
SCNpilot_cont_300_bf_scaffold_282_curated_14
bacterium YEK0313, Bacteria

Not on your lists

comp(15682..16200)
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI000378DF17
Uncharacterized protein {ECO:0000313|EMBL:CEJ14874.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein; K11901 type VI secretion system protein ImpB
SCNpilot_cont_300_bf_scaffold_282_curated_15
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16290..17840)
DNA (1551bp) protein (517aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002EED07D
hypothetical protein; K11902 type VI secretion system protein ImpA
Uncharacterized protein {ECO:0000313|EMBL:ACK51288.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
SCNpilot_cont_300_bf_scaffold_282_curated_16
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18121..20019
DNA (1899bp) protein (633aa)
Type VI secretion system Vgr family protein n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EIG8_METSB
ImpA family type VI secretion-associated protein
Type VI secretion system Vgr family protein {ECO:0000313|EMBL:ACK51287.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
SCNpilot_cont_300_bf_scaffold_282_curated_17
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20027..20587
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00030CD81A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL57985.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
SCNpilot_cont_300_bf_scaffold_282_curated_18
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20661..22184
DNA (1524bp) protein (508aa)
FHA domain containing protein n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8ETF8_METSB
FHA domain-containing protein; K11894 type VI secretion system protein ImpI
FHA domain containing protein {ECO:0000313|EMBL:ACK51800.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
SCNpilot_cont_300_bf_scaffold_282_curated_19
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22205..23080)
DNA (876bp) protein (292aa)
spermidine/putrescine ABC transporter permease n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F6EC15
ABC-type spermidine/putrescine transport system, permease component I {ECO:0000313|EMBL:KFC70088.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
multiple sugar transport system permease protein
SCNpilot_cont_300_bf_scaffold_282_curated_20
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23077..23913)
DNA (837bp) protein (279aa)
Spermidine/putrescine ABC transporter membrane component n=1 Tax=Pseudovibrio sp. (strain FO-BEG1) RepID=G8PHD6_PSEUV
Putative ABC spermidine/putrescine transporter permease protein {ECO:0000313|EMBL:KFC70089.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
spermidine/putrescine ABC transporter permease
SCNpilot_cont_300_bf_scaffold_282_curated_21
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24086..25222)
DNA (1137bp) protein (379aa)
Extracellular solute-binding n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P341_AZOS1
Maltose ABC transporter periplasmic protein {ECO:0000313|EMBL:KFC70090.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
extracellular solute-binding
SCNpilot_cont_300_bf_scaffold_282_curated_22
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25225..26304)
DNA (1080bp) protein (360aa)
Putrescine/spermidine ABC transporter ATPase n=1 Tax=Ochrobactrum sp. EGD-AQ16 RepID=U1XFG9_9RHIZ
ABC transporter related protein {ECO:0000313|EMBL:KFC70091.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
potA; spermidine/putrescine transport system ATP-binding protein
SCNpilot_cont_300_bf_scaffold_282_curated_23
Thauera phenylacetica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26514..28046
DNA (1533bp) protein (511aa)
Uncharacterized protein n=1 Tax=Thauera phenylacetica B4P RepID=N6ZP93_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:ENO96163.1}; TaxID=1234382 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera phenylacetica B4P.;"
putative methyltransferase (contains TPR repeat)
SCNpilot_cont_300_bf_scaffold_282_curated_24
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28056..28292)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5TLN0_STEMA
Uncharacterized protein {ECO:0000313|EMBL:KFN50175.1}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_282_curated_25
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28426..29373
DNA (948bp) protein (316aa)
malonyl CoA-acyl carrier protein transacylase; K00645 [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
ACP S-malonyltransferase n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI000346AE7F
SCNpilot_cont_300_bf_scaffold_282_curated_26
bacterium YEK0313, Bacteria

Not on your lists

29429..30166
DNA (738bp) protein (246aa)
3-oxoacyl-ACP reductase; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
3-oxoacyl-ACP synthase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003064220
3-oxoacyl-[acyl-carrier-protein] reductase FabG {ECO:0000313|EMBL:CEJ12613.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
SCNpilot_cont_300_bf_scaffold_282_curated_27
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30364..32706
DNA (2343bp) protein (781aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E4648D
serine/threonine protein kinase
Serine/threonine protein kinase {ECO:0000313|EMBL:ACL57994.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
SCNpilot_cont_300_bf_scaffold_282_curated_28
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32742..33266
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI00037DE428
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACK51062.1}; Flags: Precursor;; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
SCNpilot_cont_300_bf_scaffold_282_curated_29
R_Alphaproteobacteria_46_13, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33476..33715
DNA (240bp) protein (80aa)
acyl carrier protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F355AE
acpP; acyl carrier protein; K02078 acyl carrier protein
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_46_13_curated
SCNpilot_cont_300_bf_scaffold_282_curated_30
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33761..35029
DNA (1269bp) protein (423aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
3-oxoacyl-(acyl-carrier-protein) synthase 2; K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Microvirga sp. WSM3557 RepID=I4YWH4_9RHIZ
Displaying items 1-30 of 86 in total

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