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SCNpilot_cont_300_bf_scaffold_676_curated

Search features with annotation key words

Displaying items 1-30 of 89 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_676_curated_1
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..556)
DNA (555bp) protein (185aa)
L-carnitine dehydratase/bile acid-inducible protein F; K07749 formyl-CoA transferase [EC:2.8.3.16]
hypothetical protein n=1 Tax=Paracoccus sp. N5 RepID=UPI00037DAD0A
Methylobacterium aquaticum plasmid pMaq22A_2p DNA, complete genome, strain: MA-22A {ECO:0000313|EMBL:BAQ49900.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
SCNpilot_cont_300_bf_scaffold_676_curated_2
Rhodococcus sp. EsD8, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(581..1396)
DNA (816bp) protein (272aa)
Probable 5-valerolactone hydrolase n=1 Tax=Rhodococcus sp. EsD8 RepID=N1MAF2_9NOCA
Probable 5-valerolactone hydrolase {ECO:0000313|EMBL:CCW13864.1}; TaxID=1301088 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. EsD8.;"
SMP-30/gluconolaconase/LRE-like region family protein 2
SCNpilot_cont_300_bf_scaffold_676_curated_3
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1660..2835)
DNA (1176bp) protein (392aa)
luciferase-like protein; K14733 limonene 1,2-monooxygenase [EC:1.14.13.107]
Luciferase-like protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11BY6_MESSB
Monooxygenase {ECO:0000313|EMBL:KHK90058.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;"
SCNpilot_cont_300_bf_scaffold_676_curated_4
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3036..4010
DNA (975bp) protein (325aa)
Conserved protein of DIM6/NTAB family n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3HZI5_9BRAD
Conserved protein of DIM6/NTAB family {ECO:0000313|EMBL:EJN10621.1}; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_676_curated_5
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4027..4743)
DNA (717bp) protein (239aa)
monosaccharide-transporting ATPase (EC:3.6.3.17); K01996 branched-chain amino acid transport system ATP-binding protein
hypothetical protein n=1 Tax=Paracoccus sp. N5 RepID=UPI0003677E0E
LivF protein {ECO:0000313|EMBL:BAQ49891.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
SCNpilot_cont_300_bf_scaffold_676_curated_6
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4740..5465)
DNA (726bp) protein (242aa)
hypothetical protein n=1 Tax=Paracoccus sp. N5 RepID=UPI00036CDCFE
LivG protein {ECO:0000313|EMBL:BAQ49892.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
ABC transporter ATP-binding protein; K01995 branched-chain amino acid transport system ATP-binding protein
SCNpilot_cont_300_bf_scaffold_676_curated_7
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5462..6511)
DNA (1050bp) protein (350aa)
hypothetical protein n=1 Tax=Paracoccus sp. N5 RepID=UPI000382257F
LivM protein {ECO:0000313|EMBL:BAQ49893.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
branched-chain amino acid ABC transporter ATP-binding protein
SCNpilot_cont_300_bf_scaffold_676_curated_8
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6498..7388)
DNA (891bp) protein (297aa)
hypothetical protein n=1 Tax=Paracoccus sp. N5 RepID=UPI00037FBEE1
LivH protein {ECO:0000313|EMBL:BAQ49894.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
hypothetical protein; K01997 branched-chain amino acid transport system permease protein
SCNpilot_cont_300_bf_scaffold_676_curated_9
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7467..8690)
DNA (1224bp) protein (408aa)
hypothetical protein n=1 Tax=Paracoccus sp. N5 RepID=UPI0003722C31
LivK protein {ECO:0000313|EMBL:BAQ49895.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
Leu/Ile/Val-binding protein 8
SCNpilot_cont_300_bf_scaffold_676_curated_10
Sulfitobacter pseudonitzschiae, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8825..9991)
DNA (1167bp) protein (389aa)
Putative transport protein n=1 Tax=Sulfitobacter sp. EE-36 RepID=A3SFW4_9RHOB
Multidrug transporter CflA {ECO:0000313|EMBL:KEJ95936.1}; TaxID=1402135 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter pseudonitzschiae.;"
Bcr/CflA subfamily drug resistance transporter; K07552 MFS transporter, DHA1 family, bicyclomycin/chloramphenicol resistance protein
SCNpilot_cont_300_bf_scaffold_676_curated_11
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10109..11245)
DNA (1137bp) protein (379aa)
butyryl-CoA dehydrogenase (EC:1.3.8.1)
Butyryl-CoA dehydrogenase {ECO:0000313|EMBL:AEH10311.1}; EC=1.3.8.1 {ECO:0000313|EMBL:AEH10311.1};; TaxID=656024 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
butyryl-CoA dehydrogenase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC890
SCNpilot_cont_300_bf_scaffold_676_curated_12
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11260..12093)
DNA (834bp) protein (278aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8B646_FRADG
enoyl-CoA hydratase/isomerase
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:AEH10325.1}; TaxID=656024 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
SCNpilot_cont_300_bf_scaffold_676_curated_13
Rhodococcus sp. EsD8, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12150..13724)
DNA (1575bp) protein (525aa)
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:CCW13877.1}; EC=6.2.1.3 {ECO:0000313|EMBL:CCW13877.1};; TaxID=1301088 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. EsD8.;"
AMP-dependent synthetase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC88B
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
SCNpilot_cont_300_bf_scaffold_676_curated_14
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13821..14213)
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC88C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH10323.1}; TaxID=656024 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
SCNpilot_cont_300_bf_scaffold_676_curated_15
Rhodococcus sp. NCIMB 9784, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14210..15442)
DNA (1233bp) protein (411aa)
acetyl-CoA acetyltransferase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC88D
Non-specific lipid carrier-like protein {ECO:0000313|EMBL:AAK50624.1}; TaxID=157732 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. NCIMB 9784.;"
acetyl-CoA acetyltransferase-like protein
SCNpilot_cont_300_bf_scaffold_676_curated_16
Rhodococcus sp. NCIMB 9784, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15453..15926)
DNA (474bp) protein (158aa)
dehydratase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC88E
FAD-binding protein {ECO:0000313|EMBL:AAK50623.1}; TaxID=157732 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. NCIMB 9784.;"
MaoC domain-containing protein dehydratase
SCNpilot_cont_300_bf_scaffold_676_curated_17
Paracoccus sp. 361, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16180..16965)
DNA (786bp) protein (262aa)
3-oxoacyl-(acyl-carrier-protein) reductase; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
Putative 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QPL1_BREDI
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:KIX17393.1}; TaxID=1603292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 361.;"
SCNpilot_cont_300_bf_scaffold_676_curated_18
Bordetella parapertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17145..18170
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Bordetella parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253) RepID=Q7WAT8_BORPA
hypothetical protein; K07046
Uncharacterized protein {ECO:0000313|EMBL:CAE36580.1}; TaxID=257311 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253).;"
SCNpilot_cont_300_bf_scaffold_676_curated_19
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18203..19114
DNA (912bp) protein (304aa)
NADPH:quinone reductase (EC:1.6.5.5)
NADPH:quinone reductase n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6F0U1_SPHCR
Alcohol dehydrogenase {ECO:0000313|EMBL:AJR23264.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;"
SCNpilot_cont_300_bf_scaffold_676_curated_20
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20196..21899)
DNA (1704bp) protein (568aa)
ABC-type Fe3+ transport system, permease component n=1 Tax=Saccharomonospora marina XMU15 RepID=H5WZQ1_9PSEU
ABC-type Fe3+ transport system, permease component {ECO:0000313|EMBL:EHR50783.1}; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
iron ABC transporter permease; K02011 iron(III) transport system permease protein
SCNpilot_cont_300_bf_scaffold_676_curated_21
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21896..23011)
DNA (1116bp) protein (372aa)
sfuC; spermidine/putrescine ABC transporter ATPase (EC:3.6.3.30); K11072 spermidine/putrescine transport system ATP-binding protein [EC:3.6.3.31]
Polyamine-transporting ATPase n=1 Tax=Saccharomonospora paurometabolica YIM 90007 RepID=G4J5Z6_9PSEU
ABC-type spermidine/putrescine transport system, ATPase component {ECO:0000313|EMBL:EHR50784.1}; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
SCNpilot_cont_300_bf_scaffold_676_curated_22
Rhodococcus wratislaviensis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23091..24086)
DNA (996bp) protein (332aa)
Transporter n=2 Tax=Thermobifida fusca RepID=R9F866_THEFU
Putative ABC transporter substrate-binding protein {ECO:0000313|EMBL:GAF48151.1}; TaxID=1219028 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus wratislaviensis NBRC 100605.;"
transporter; K02012 iron(III) transport system substrate-binding protein
SCNpilot_cont_300_bf_scaffold_676_curated_23
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24249..25442
DNA (1194bp) protein (398aa)
formyl-CoA transferase (EC:2.8.3.16)
Formyl-CoA transferase {ECO:0000313|EMBL:AEH10312.1}; EC=2.8.3.16 {ECO:0000313|EMBL:AEH10312.1};; TaxID=656024 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
Formyl-CoA transferase n=1 Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8AWT7_FRADG
SCNpilot_cont_300_bf_scaffold_676_curated_24
Rhodococcus sp. EsD8, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25439..26035)
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Rhodococcus sp. P14 RepID=UPI00029A09E3
Uncharacterized protein {ECO:0000313|EMBL:CCW13859.1}; TaxID=1301088 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. EsD8.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_676_curated_25
Celeribacter indicus, Celeribacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26071..27903)
DNA (1833bp) protein (611aa)
Cyclododecanone monooxygenase n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0C2N9_HYPNA
Cyclododecanone monooxygenase {ECO:0000313|EMBL:AJE47855.1}; TaxID=1208324 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Celeribacter.;" source="Celeribacter indicus.;"
cyclododecanone monooxygenase
SCNpilot_cont_300_bf_scaffold_676_curated_26
unknown

Not on your lists

comp(31225..31371)
DNA (147bp) protein (49aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_676_curated_27
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31465..31626
DNA (162bp) protein (54aa)
Transcriptional regulator, Cro/CI family n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9EQL7_SORC5
Cro/CI family transcriptional regulator
XRE family transcriptional regulator {ECO:0000313|EMBL:KDR39170.1}; TaxID=60547 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glathei.;"
SCNpilot_cont_300_bf_scaffold_676_curated_28
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31642..32511
DNA (870bp) protein (290aa)
CDP-diacylglycerol--serine O-phosphatidyltransferase; K00998 phosphatidylserine synthase [EC:2.7.8.8]
CDP-diacylglycerol-serine O-phosphatidyltransferase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8HXJ9_AZOC5
CDP-diacylglycerol-serine O-phosphatidyltransferase {ECO:0000313|EMBL:BAF87508.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCNpilot_cont_300_bf_scaffold_676_curated_29
bacterium YEK0313, Bacteria

Not on your lists

comp(32565..32939)
DNA (375bp) protein (125aa)
Uncharacterized protein {ECO:0000313|EMBL:CEJ13353.1}; Flags: Precursor;; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
SCNpilot_cont_300_bf_scaffold_676_curated_30
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33044..33262
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=6 Tax=Caulobacter RepID=IF1_CAUCR
infA; translation initiation factor IF-1; K02518 translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000255|HAMAP-Rule:MF_00075}; TaxID=190650 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus (strain ATCC 19089 / CB15).;"
Displaying items 1-30 of 89 in total

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