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SCNpilot_cont_300_bf_scaffold_861_curated

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_861_curated_1
unknown

Not on your lists

1..102
DNA (102bp) protein (34aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_861_curated_2
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(140..436)
DNA (297bp) protein (99aa)
TetR family transcriptional regulator n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y5N4_9RHIZ
TetR family transcriptional regulator {ECO:0000313|EMBL:KGM34259.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
TetR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_861_curated_3
unknown

Not on your lists

925..1224
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FR59_9RHIZ
SCNpilot_cont_300_bf_scaffold_861_curated_4
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1297..1758)
DNA (462bp) protein (154aa)
RES domain protein n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VCP5_RHOPX
RES domain protein {ECO:0000313|EMBL:CDN51352.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
RES domain-containing protein
SCNpilot_cont_300_bf_scaffold_861_curated_5
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1758..2192)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IQB1_XANP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS70207.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCNpilot_cont_300_bf_scaffold_861_curated_6
Mesorhizobium sp. LNJC372A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2271..3284)
DNA (1014bp) protein (338aa)
UPI0003CE86E5 related cluster n=1 Tax=unknown RepID=UPI0003CE86E5
LacI family transcriptional regulator {ECO:0000313|EMBL:ESY59181.1}; TaxID=1287256 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC372A00.;"
SCC54.16; LacI family transcription regulator
SCNpilot_cont_300_bf_scaffold_861_curated_7
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3406..4491
DNA (1086bp) protein (362aa)
galactonate dehydratase (EC:4.2.1.6); K01684 galactonate dehydratase [EC:4.2.1.6]
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00035FE1C5
Galactonate dehydratase {ECO:0000313|EMBL:CDN51958.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
SCNpilot_cont_300_bf_scaffold_861_curated_8
bacterium UASB270, Bacteria

Not on your lists

4518..5795
DNA (1278bp) protein (426aa)
ABC-type sugar transport system, periplasmic component n=1 Tax=Rhizobium sp. CF142 RepID=J1T0T7_9RHIZ
ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:GAK56711.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
ABC-type sugar transport system, periplasmic component
SCNpilot_cont_300_bf_scaffold_861_curated_9
unknown

Not on your lists

comp(6016..6168)
DNA (153bp) protein (51aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_861_curated_10
GWC2_Spirochaetes_52_13_curated, Spirochaetes, Bacteria

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6336..6707
DNA (372bp) protein (124aa)
Putative uncharacterized protein id=4080504 bin=GWC2_Spirochaete_52_13 species=Clostridium asparagiforme genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
carbohydrate ABC transporter membrane protein 1, CUT1 family; K10118 multiple sugar transport system permease protein
Tax=GWC2_Spirochaetes_52_13_curated
SCNpilot_cont_300_bf_scaffold_861_curated_11
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6704..7540
DNA (837bp) protein (279aa)
ABC transporter permease n=1 Tax=Nesterenkonia alba RepID=UPI0003B748FE
ABC-type sugar transport system, permease component {ECO:0000313|EMBL:EMS68987.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
ABC transporter membrane spanning protein; K02026 multiple sugar transport system permease protein
SCNpilot_cont_300_bf_scaffold_861_curated_12
Nitratireductor basaltis, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7697..9958)
DNA (2262bp) protein (754aa)
heavy metal translocating P-type ATPase; K01534 Cd2+/Zn2+-exporting ATPase [EC:3.6.3.3 3.6.3.5]
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000319FEAD
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:KFB09622.1}; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor basaltis.;"
SCNpilot_cont_300_bf_scaffold_861_curated_13
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10098..11129)
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IWM3_METNO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL62914.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
SCNpilot_cont_300_bf_scaffold_861_curated_14
unknown

Not on your lists

comp(11702..12355)
DNA (654bp) protein (218aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_861_curated_15
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12694..13674
DNA (981bp) protein (327aa)
Plasmid partitioning protein, RepB n=1 Tax=Methylocystis sp. (strain SC2) RepID=I4EB75_METSZ
Plasmid partitioning protein, RepB {ECO:0000313|EMBL:CCD32231.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
plasmid partitioning protein RepB
SCNpilot_cont_300_bf_scaffold_861_curated_16
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13874..15286
DNA (1413bp) protein (471aa)
replication initiation protein n=1 Tax=Methylosinus sp. LW4 RepID=UPI000360D6DD
Replication protein C {ECO:0000313|EMBL:CCD31929.2}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
replication initiation protein RepC
SCNpilot_cont_300_bf_scaffold_861_curated_17
bacterium YEK0313, Bacteria

Not on your lists

15491..17320
DNA (1830bp) protein (610aa)
N-methylhydantoinase (ATP-hydrolyzing) B 2; K01474 N-methylhydantoinase B [EC:3.5.2.14]
N-methylhydantoinase B/acetone carboxylase, alpha subunit n=1 Tax=Rhizobium sp. CF080 RepID=J2II34_9RHIZ
Acetophenone carboxylase delta subunit {ECO:0000313|EMBL:CEJ11809.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
SCNpilot_cont_300_bf_scaffold_861_curated_18
bacterium YEK0313, Bacteria

Not on your lists

17307..19340
DNA (2034bp) protein (678aa)
5-oxoprolinase (EC:3.5.2.9); K01473 N-methylhydantoinase A [EC:3.5.2.14]
Hydantoin utilization protein n=2 Tax=Ketogulonicigenium vulgare RepID=E3F600_KETVY
Acetophenone carboxylase gamma subunit {ECO:0000313|EMBL:CEJ11808.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
SCNpilot_cont_300_bf_scaffold_861_curated_19
bacterium YEK0313, Bacteria

Not on your lists

19361..20764
DNA (1404bp) protein (468aa)
Putative Peptidase, M20/M25/M40 family n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0S2D6_9BRAD
Succinyl-diaminopimelate desuccinylase {ECO:0000313|EMBL:CEJ11807.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
putative Peptidase, M20/M25/M40 family
SCNpilot_cont_300_bf_scaffold_861_curated_20
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20811..21947
DNA (1137bp) protein (379aa)
M20 family peptidase (EC:3.4.-.-); K01295 glutamate carboxypeptidase [EC:3.4.17.11]
Putative peptidase M20 family {ECO:0000313|EMBL:ABQ32355.1}; EC=3.4.-.- {ECO:0000313|EMBL:ABQ32355.1};; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
Putative peptidase M20 family n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5E861_BRASB
SCNpilot_cont_300_bf_scaffold_861_curated_21
Ketogulonicigenium vulgare, Ketogulonicigenium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22044..23831)
DNA (1788bp) protein (596aa)
Peptidase, M28 family protein (EC:3.4.17.21)
Peptidase, M28 family protein {ECO:0000313|EMBL:AEM42821.1}; EC=3.4.17.21 {ECO:0000313|EMBL:AEM42821.1};; TaxID=759362 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ketogulonicigenium.;" source="Ketogulonicigenium vulgare (strain WSH-001).;"
Peptidase, M28 family protein n=1 Tax=Ketogulonicigenium vulgare (strain WSH-001) RepID=F9YBR9_KETVW
SCNpilot_cont_300_bf_scaffold_861_curated_22
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24011..25714
DNA (1704bp) protein (568aa)
Extracellular solute-binding protein, family 5 n=1 Tax=Rhizobium sp. CF080 RepID=J2TJ56_9RHIZ
Twin-arginine translocation pathway signal protein {ECO:0000313|EMBL:KGD96315.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
Twin-arginine translocation pathway signal
SCNpilot_cont_300_bf_scaffold_861_curated_23
Actibacterium mucosum, Actibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25776..26753
DNA (978bp) protein (326aa)
Binding-protein-dependent transport systems inner membrane component n=2 Tax=Ketogulonicigenium vulgare RepID=E3F5Z4_KETVY
Peptide ABC transporter permease {ECO:0000313|EMBL:KAJ55362.1}; TaxID=1454373 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Actibacterium.;" source="Actibacterium mucosum KCTC 23349.;"
binding-protein-dependent transport systems inner membrane component; K02033 peptide/nickel transport system permease protein
SCNpilot_cont_300_bf_scaffold_861_curated_24
Ketogulonicigenium vulgare, Ketogulonicigenium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26737..27660
DNA (924bp) protein (308aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=2 Tax=Ketogulonicigenium vulgare RepID=E3F5Z5_KETVY
dipeptide/oligopeptide/nickel ABC transporter permease; K02034 peptide/nickel transport system permease protein
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:ADO44389.1}; TaxID=880591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ketogulonicigenium.;" source="Ketogulonicigenium vulgare (strain Y25).;"
SCNpilot_cont_300_bf_scaffold_861_curated_25
Actibacterium mucosum, Actibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27833..28669
DNA (837bp) protein (279aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=Ketogulonicigenium vulgare (strain WSH-001) RepID=F9YBS3_KETVW
Peptide ABC transporter ATPase {ECO:0000313|EMBL:KAJ55360.1}; TaxID=1454373 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Actibacterium.;" source="Actibacterium mucosum KCTC 23349.;"
Oligopeptide/dipeptide ABC transporter, ATPase subunit
SCNpilot_cont_300_bf_scaffold_861_curated_26
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28657..29640
DNA (984bp) protein (328aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein n=1 Tax=Rhizobium sp. CF080 RepID=J2HJX9_9RHIZ
Oligopeptide ABC transporter {ECO:0000313|EMBL:CDN51344.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
oligopeptide ABC transporter ATPase; K02032 peptide/nickel transport system ATP-binding protein
SCNpilot_cont_300_bf_scaffold_861_curated_27
uncultured gamma proteobacterium HF4000_06A21, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29682..30875
DNA (1194bp) protein (398aa)
Imidazolonepropionase and related amidohydrolases n=1 Tax=uncultured gamma proteobacterium HF4000_06A21 RepID=E7C836_9GAMM
Imidazolonepropionase and related amidohydrolases {ECO:0000313|EMBL:ADI23610.1}; TaxID=723581 species="Bacteria; Proteobacteria; Gammaproteobacteria; environmental samples.;" source="uncultured gamma proteobacterium HF4000_06A21.;"
Aryldialkylphosphatase related protein
SCNpilot_cont_300_bf_scaffold_861_curated_28
Ketogulonicigenium vulgare, Ketogulonicigenium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30894..31667)
DNA (774bp) protein (258aa)
IclR family transcriptional regulator n=2 Tax=Ketogulonicigenium vulgare RepID=E3F5Y6_KETVY
IclR family transcriptional regulator
IclR family transcriptional regulator {ECO:0000313|EMBL:ADO44380.1}; TaxID=880591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ketogulonicigenium.;" source="Ketogulonicigenium vulgare (strain Y25).;"
SCNpilot_cont_300_bf_scaffold_861_curated_29
Ketogulonicigenium vulgare, Ketogulonicigenium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31824..33521
DNA (1698bp) protein (566aa)
Peptidase, M28 family protein n=2 Tax=Ketogulonicigenium vulgare RepID=F9YBR3_KETVW
Peptidase, M28 family protein
Putative peptidase {ECO:0000313|EMBL:ADO44378.1}; TaxID=880591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ketogulonicigenium.;" source="Ketogulonicigenium vulgare (strain Y25).;"
SCNpilot_cont_300_bf_scaffold_861_curated_30
Hoeflea sp. IMCC20628, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33608..34306)
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000318C56D
ABC-type branched-chain amino acid transport system, periplasmic component {ECO:0000313|EMBL:AKH98871.1}; TaxID=1620421 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. IMCC20628.;"
ABC branched chain amino acid transporter, periplasmic ligandbinding protein
Displaying items 1-30 of 34 in total

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