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SCNpilot_cont_300_bf_scaffold_265_curated

Search features with annotation key words

Displaying items 1-30 of 427 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_265_curated_1
unknown

Not on your lists

3..98
DNA (96bp) protein (32aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_265_curated_2
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(164..1537)
DNA (1374bp) protein (458aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Signal transduction histidine kinase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YNC4_9RHIZ
integral membrane sensor signal transduction histidine kinase
SCNpilot_cont_300_bf_scaffold_265_curated_3
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1534..2208)
DNA (675bp) protein (225aa)
transcriptional regulator n=1 Tax=Methylosinus sp. LW4 RepID=UPI000376EEAF
two component transcriptional regulator; K02483 two-component system, OmpR family, response regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ABS68406.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCNpilot_cont_300_bf_scaffold_265_curated_4
unknown

Not on your lists

comp(2225..2539)
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI00036F84AA
SCNpilot_cont_300_bf_scaffold_265_curated_5
unknown

Not on your lists

comp(2803..3039)
DNA (237bp) protein (79aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_265_curated_6
unknown

Not on your lists

comp(3039..3254)
DNA (216bp) protein (72aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_265_curated_7
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3251..3850)
DNA (600bp) protein (200aa)
Membrane-bound lytic murein transglycosylase B protein n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9JYV3_AGRVS
Membrane-bound lytic murein transglycosylase B protein
Membrane-bound lytic murein transglycosylase B protein {ECO:0000313|EMBL:ACM37199.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;"
SCNpilot_cont_300_bf_scaffold_265_curated_8
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3900..5966)
DNA (2067bp) protein (689aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YND0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFG66643.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_265_curated_9
unknown

Not on your lists

6848..7552
DNA (705bp) protein (235aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_265_curated_10
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7723..8160)
DNA (438bp) protein (146aa)
NLP/P60 family protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6UAN4_9RHOB
NLP/P60 family protein {ECO:0000313|EMBL:EJW10161.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
phage cell wall peptidase, NlpC/P60
SCNpilot_cont_300_bf_scaffold_265_curated_11
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8157..9044)
DNA (888bp) protein (296aa)
Phage protein BR0599 n=1 Tax=Microvirga sp. WSM3557 RepID=I4YND2_9RHIZ
Phage protein BR0599 {ECO:0000313|EMBL:EIM25474.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_265_curated_12
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9048..9692)
DNA (645bp) protein (215aa)
Glycoside hydrolase, family 24 n=2 Tax=Oligotropha carboxidovorans RepID=B6JFG1_OLICO
glycoside hydrolase family protein
Uncharacterized protein {ECO:0000313|EMBL:AEI06188.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_cont_300_bf_scaffold_265_curated_13
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9700..10296)
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E44B0D
Gene transfer agent (GTA) like protein {ECO:0000313|EMBL:ABD87379.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
gene transfer agent (GTA) like protein
SCNpilot_cont_300_bf_scaffold_265_curated_14
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10289..10498)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A4Z6_STAND
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADH88044.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
SCNpilot_cont_300_bf_scaffold_265_curated_15
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10495..10845)
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002EAA63A
gene transfer agent (GTA) like protein
Gene transfer agent (GTA) like protein {ECO:0000313|EMBL:ADH88043.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
SCNpilot_cont_300_bf_scaffold_265_curated_16
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10853..11263)
DNA (411bp) protein (137aa)
tail protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00031AC9F9
Phage major tail protein, TP901-1 family {ECO:0000313|EMBL:EIM25481.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
TP901-1 family phage major tail protein
SCNpilot_cont_300_bf_scaffold_265_curated_17
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11276..11683)
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI000368F22F
hypothetical protein
Gene transfer agent (GTA) orfg8 {ECO:0000313|EMBL:ABJ05860.1}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
SCNpilot_cont_300_bf_scaffold_265_curated_18
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11680..12027)
DNA (348bp) protein (116aa)
Phage head-tail adaptor n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A4Z2_STAND
phage head-tail adaptor
Phage head-tail adaptor {ECO:0000313|EMBL:ADH88040.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
SCNpilot_cont_300_bf_scaffold_265_curated_19
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12027..12599)
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JGV2_HYPSM
Uncharacterized protein {ECO:0000313|EMBL:KFG66634.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_265_curated_20
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12601..13335
DNA (735bp) protein (245aa)
peptidase S1 n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI000381753C
peptidase S1 and S6 chymotrypsin/Hap
Peptidase S1 and S6 chymotrypsin/Hap {ECO:0000313|EMBL:ACA18780.1}; Flags: Precursor;; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
SCNpilot_cont_300_bf_scaffold_265_curated_21
Methylobacterium sp. GXF4, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13387..14244
DNA (858bp) protein (286aa)
Peptidase S1 and S6 chymotrypsin/Hap n=1 Tax=Methylobacterium sp. GXF4 RepID=I9CIH1_9RHIZ
Peptidase S1 and S6 chymotrypsin/Hap {ECO:0000313|EMBL:EIZ83280.1}; TaxID=1096546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. GXF4.;"
peptidase S1 and S6 chymotrypsin/Hap
SCNpilot_cont_300_bf_scaffold_265_curated_22
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14275..15525)
DNA (1251bp) protein (417aa)
capsid protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002DE6814
Phage major capsid protein, HK97 family {ECO:0000313|EMBL:EIM25487.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
phage major capsid protein
SCNpilot_cont_300_bf_scaffold_265_curated_23
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15522..16103)
DNA (582bp) protein (194aa)
primosome assembly protein PriA n=1 Tax=Methylopila sp. M107 RepID=UPI0003685554
Primosomal replication protein N {ECO:0000313|EMBL:KGD85809.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
Phage prohead protease, HK97 family
SCNpilot_cont_300_bf_scaffold_265_curated_24
unknown

Not on your lists

comp(16100..16276)
DNA (177bp) protein (59aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_265_curated_25
unknown

Not on your lists

comp(16312..16545)
DNA (234bp) protein (78aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_265_curated_26
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16538..17731)
DNA (1194bp) protein (398aa)
Phage portal protein, HK97 n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q217S6_RHOPB
Phage portal protein, HK97
Phage portal protein, HK97 {ECO:0000313|EMBL:ABD87360.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
SCNpilot_cont_300_bf_scaffold_265_curated_27
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17784..19037)
DNA (1254bp) protein (418aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00037CBCC4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS68377.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCNpilot_cont_300_bf_scaffold_265_curated_28
unknown

Not on your lists

comp(18979..19680)
DNA (702bp) protein (234aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_265_curated_29
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20108..22525)
DNA (2418bp) protein (806aa)
Pyruvate dehydrogenase E1 component {ECO:0000256|PIRNR:PIRNR000156}; EC=1.2.4.1 {ECO:0000256|PIRNR:PIRNR000156};; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
putative transketolase; K00163 pyruvate dehydrogenase E1 component [EC:1.2.4.1]
Pyruvate dehydrogenase complex, dehydrogenase (E1) component n=1 Tax=Microvirga sp. WSM3557 RepID=I4YZI0_9RHIZ
SCNpilot_cont_300_bf_scaffold_265_curated_30
bacterium YEK0313, Bacteria

Not on your lists

comp(22714..23148)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DNG2_BRAJP
Putative reactive intermediate deaminase TdcF {ECO:0000313|EMBL:CEJ10081.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
Displaying items 1-30 of 427 in total

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