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SCNpilot_cont_300_bf_scaffold_474_curated

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_474_curated_1
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..490
DNA (489bp) protein (163aa)
UPI0003CE84F6 related cluster n=1 Tax=unknown RepID=UPI0003CE84F6
putative transposase
Putative transposase {ECO:0000313|EMBL:CDH81319.1}; TaxID=1401243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti RU11/001.;"
SCNpilot_cont_300_bf_scaffold_474_curated_2
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(332..991)
DNA (660bp) protein (220aa)
RibD domain protein n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1CZA3_MYXXD
riboflavin biosynthesis protein RibD domain-containing protein
RibD domain protein {ECO:0000313|EMBL:ABF90699.1}; TaxID=246197 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus xanthus (strain DK 1622).;"
SCNpilot_cont_300_bf_scaffold_474_curated_3
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1803..3584)
DNA (1782bp) protein (594aa)
TrkA-C domain protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IPT8_METNO
Transporter, divalent anion:Na+ symporter (DASS) family {ECO:0000313|EMBL:KFC73883.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
TrkA-C domain-containing protein
SCNpilot_cont_300_bf_scaffold_474_curated_4
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3745..4257)
DNA (513bp) protein (171aa)
Gluconate 2-dehydrogenase flavoprotein {ECO:0000313|EMBL:CDM61857.1}; EC=1.1.99.3 {ECO:0000313|EMBL:CDM61857.1};; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;"
gluconate 2-dehydrogenase (acceptor) (EC:1.1.99.3); K06151 gluconate 2-dehydrogenase alpha chain [EC:1.1.99.3]
Gluconate 2-dehydrogenase , membrane-bound, flavoprotein n=1 Tax=Rhodovulum sp. PH10 RepID=J5PVV1_9RHOB
SCNpilot_cont_300_bf_scaffold_474_curated_5
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4500..4973
DNA (474bp) protein (158aa)
Transcriptional regulator n=1 Tax=Beggiatoa alba B18LD RepID=I3CJT5_9GAMM
MarR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
SCNpilot_cont_300_bf_scaffold_474_curated_6
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5096..6256
DNA (1161bp) protein (387aa)
fomryl-CoA transferase (EC:2.8.3.16)
Formyl-CoA transferase n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AYM5_DELSC
Formyl-CoA transferase {ECO:0000313|EMBL:ETR75823.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
SCNpilot_cont_300_bf_scaffold_474_curated_7
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6331..7848
DNA (1518bp) protein (506aa)
Bacterial extracellular solute-binding protein, family 5 n=1 Tax=Roseobacter sp. GAI101 RepID=B7RMT0_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KGF67943.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
ABC-type dipeptide transport system, Extracellular component
SCNpilot_cont_300_bf_scaffold_474_curated_8
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7860..8804
DNA (945bp) protein (315aa)
ABC transporter permease n=1 Tax=Rhodococcus ruber BKS 20-38 RepID=M2ZHK2_9NOCA
Uncharacterized protein {ECO:0000313|EMBL:KGF67942.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
ABC di/oligopeptide transporter, inner membrane subunit
SCNpilot_cont_300_bf_scaffold_474_curated_9
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8870..10732
DNA (1863bp) protein (621aa)
Peptide/opine/nickel uptake family ABC transporter, permease/ATP-binding protein n=1 Tax=Roseobacter sp. GAI101 RepID=B7RMT3_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KGF67941.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
oligopeptide/dipeptide ABC transporter, ATPase subunit
SCNpilot_cont_300_bf_scaffold_474_curated_10
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10729..11748
DNA (1020bp) protein (340aa)
Peptide/opine/nickel uptake family ABC transporter, permease/ATP-binding protein n=1 Tax=Roseobacter sp. GAI101 RepID=B7RMT3_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KGF67947.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
oligopeptide/dipeptide ABC transporter ATP-binding protein; K02032 peptide/nickel transport system ATP-binding protein
SCNpilot_cont_300_bf_scaffold_474_curated_11
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11750..12709
DNA (960bp) protein (320aa)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI0003805378
Uncharacterized protein {ECO:0000313|EMBL:KGF67940.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
chlorophyllase
SCNpilot_cont_300_bf_scaffold_474_curated_12
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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13056..13748
DNA (693bp) protein (231aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VP02_RHOPX
Crp/Fnr family transcriptional regulator
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:ADU42448.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
SCNpilot_cont_300_bf_scaffold_474_curated_13
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13964..15631
DNA (1668bp) protein (556aa)
ccoN; cbb3-type cytochrome c oxidase subunit I (EC:1.9.3.1); K00404 cytochrome c oxidase cbb3-type subunit I [EC:1.9.3.1]
Cytochrome c oxidase, cbb3-type, subunit I n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PEI5_9BRAD
Cytochrome c oxidase, cbb3-type, subunit I {ECO:0000313|EMBL:EKS36738.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_cont_300_bf_scaffold_474_curated_14
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15636..16367
DNA (732bp) protein (244aa)
Cytochrome c oxidase, cbb3-type, subunit II n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P7M9_9BRAD
Cytochrome c oxidase, cbb3-type, subunit II {ECO:0000313|EMBL:EKS36739.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
ccoO2; cbb3-type cytochrome oxidase, subunit CcoO; K00405 cytochrome c oxidase cbb3-type subunit II
SCNpilot_cont_300_bf_scaffold_474_curated_15
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16371..16538
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PAY4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS36740.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
cbb3-type cytochrome oxidase, subunit CcoQ
SCNpilot_cont_300_bf_scaffold_474_curated_16
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16529..17404
DNA (876bp) protein (292aa)
Cbb3-type cytochrome c oxidase subunit n=1 Tax=Afipia felis ATCC 53690 RepID=K8NV23_AFIFE
Cbb3-type cytochrome c oxidase subunit {ECO:0000256|PIRNR:PIRNR000006}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
cbb3-type cytochrome oxidase, subunit CcoP
SCNpilot_cont_300_bf_scaffold_474_curated_17
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17401..17613
DNA (213bp) protein (71aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002FD42A2
Putative uncharacterized protein {ECO:0000313|EMBL:EHK53994.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_474_curated_18
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17648..18442
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PEI8_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS36743.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
putative transmembrane protein
SCNpilot_cont_300_bf_scaffold_474_curated_19
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18467..20719
DNA (2253bp) protein (751aa)
fixI; nitrogen fixation protein FixI (EC:3.6.3.-)
Copper-translocating P-type ATPase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P7N2_9BRAD
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:EFI51282.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
SCNpilot_cont_300_bf_scaffold_474_curated_20
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20716..20874
DNA (159bp) protein (53aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00037DC25A
cytochrome oxidase maturation protein, cbb3-type
Cytochrome oxidase maturation protein, cbb3-type {ECO:0000313|EMBL:EKS36745.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
SCNpilot_cont_300_bf_scaffold_474_curated_21
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21061..22311
DNA (1251bp) protein (417aa)
aminopeptidase II; K01269 aminopeptidase [EC:3.4.11.-]
Aminopeptidase II n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8HWI2_AZOC5
Aminopeptidase {ECO:0000313|EMBL:KFC70967.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
SCNpilot_cont_300_bf_scaffold_474_curated_22
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22387..23031
DNA (645bp) protein (215aa)
SAM-dependent methyltransferase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FM89_9RHIZ
SAM-dependent methyltransferase {ECO:0000313|EMBL:ESX81353.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
putative methyltransferase
SCNpilot_cont_300_bf_scaffold_474_curated_23
unknown

Not on your lists

comp(23042..23599)
DNA (558bp) protein (186aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_474_curated_24
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24101..24652
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UEA5_METS4
hypothetical protein; K09985 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACA15621.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
SCNpilot_cont_300_bf_scaffold_474_curated_25
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24657..24848
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2JSS6_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KGM31305.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_474_curated_26
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24841..25083
DNA (243bp) protein (81aa)
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI00035DD1A9
Uncharacterized protein {ECO:0000313|EMBL:KFC73781.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Arylsulfate sulfotransferase-related protein
SCNpilot_cont_300_bf_scaffold_474_curated_27
Methylobacterium radiotolerans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25109..28573)
DNA (3465bp) protein (1155aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000313687D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB26911.1}; Flags: Precursor;; TaxID=426355 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM; 2831).;"
SCNpilot_cont_300_bf_scaffold_474_curated_28
bacterium YEK0313, Bacteria

Not on your lists

comp(28662..30071)
DNA (1410bp) protein (470aa)
FAD linked oxidase domain-containing protein; K00102 D-lactate dehydrogenase (cytochrome) [EC:1.1.2.4]
FAD/FMN-dependent dehydrogenase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YVK1_9RHIZ
Putative FAD-linked oxidoreductase {ECO:0000313|EMBL:CEJ15369.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
SCNpilot_cont_300_bf_scaffold_474_curated_29
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30229..30771
DNA (543bp) protein (181aa)
hypothetical protein; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-]
Uncharacterized protein n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UAH7_METS4
Uncharacterized protein {ECO:0000313|EMBL:ACA16498.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
SCNpilot_cont_300_bf_scaffold_474_curated_30
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30764..31405)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZEZ3_AZOL4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBS89941.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
Displaying items 1-30 of 45 in total

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