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SCNpilot_cont_300_bf_scaffold_347_curated

Search features with annotation key words

Displaying items 91-120 of 128 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_347_curated_91
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

117715..118248
DNA (534bp) protein (178aa)
MnbD n=1 Tax=Comamonas sp. JS46 RepID=Q5GDA1_9BURK
Trap dicarboxylate transporter, dctp subunit
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
SCNpilot_cont_300_bf_scaffold_347_curated_92
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

118303..118716
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00031A797F
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
SCNpilot_cont_300_bf_scaffold_347_curated_93
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(118788..119864)
DNA (1077bp) protein (359aa)
Transcriptional regulator LysR family n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=F8GW09_CUPNN
LysR family transcriptional regulator
Transcriptional regulator LysR family {ECO:0000313|EMBL:AEI82698.1}; TaxID=1042878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) (Ralstonia; eutropha).;"
SCNpilot_cont_300_bf_scaffold_347_curated_94
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

120209..120856
DNA (648bp) protein (216aa)
N-carbamoylsarcosine amidase (EC:3.5.1.59)
N-carbamoylsarcosine amidase n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AQA8_DELSC
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
SCNpilot_cont_300_bf_scaffold_347_curated_95
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

121184..121834
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002F41F7C
polysaccharide deacetylase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
SCNpilot_cont_300_bf_scaffold_347_curated_96
Agrobacterium arsenijevicii, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(121894..122850)
DNA (957bp) protein (319aa)
DNA-binding domain-containing protein, AraC-type n=1 Tax=Rhizobium sp. CF080 RepID=J3BKM9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KJF69955.1}; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. KFB 330.;"
AraC family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_347_curated_97
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

123089..124057
DNA (969bp) protein (323aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI00031C033D
periplasmic binding protein/LacI transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
SCNpilot_cont_300_bf_scaffold_347_curated_98
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

124089..125591
DNA (1503bp) protein (501aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI000312E415
ABC transporter
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
SCNpilot_cont_300_bf_scaffold_347_curated_99
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

125597..126553
DNA (957bp) protein (319aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI00037703FF
inner-membrane translocator
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
SCNpilot_cont_300_bf_scaffold_347_curated_100
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

126559..127551
DNA (993bp) protein (331aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002F10055
inner-membrane translocator
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
SCNpilot_cont_300_bf_scaffold_347_curated_101
Celeribacter indicus, Celeribacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

127563..128624
DNA (1062bp) protein (354aa)
ycdM; monooxygenase; K09018 pyrimidine oxygenase [EC:1.14.99.46]
Putative enzyme (Monooxygenase) n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z900_9GAMM
Putative monooxygenase {ECO:0000313|EMBL:AJE46690.1}; TaxID=1208324 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Celeribacter.;" source="Celeribacter indicus.;"
SCNpilot_cont_300_bf_scaffold_347_curated_102
Pseudomonas entomophila, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(129054..129620)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Pseudomonas entomophila (strain L48) RepID=Q1IAD0_PSEE4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAK15391.1}; TaxID=384676 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas entomophila (strain L48).;"
SCNpilot_cont_300_bf_scaffold_347_curated_103
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(129647..130864)
DNA (1218bp) protein (406aa)
Low temperature requirement A n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X0T8_OCHA4
Putative transmembrane protein {ECO:0000313|EMBL:AHK05007.1}; TaxID=1435057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens LBA4213 (Ach5).;"
low temperature requirement A
SCNpilot_cont_300_bf_scaffold_347_curated_104
Agrobacterium arsenijevicii, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(130880..131149)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Rhizobium lupini HPC(L) RepID=K5CXB4_RHILU
Membrane protein {ECO:0000313|EMBL:KJF72571.1}; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. KFB 330.;"
conserved membrane protein of unknown function
SCNpilot_cont_300_bf_scaffold_347_curated_105
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(131163..132539)
DNA (1377bp) protein (459aa)
aldehyde dehydrogenase; K00128 aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
Aldehyde dehydrogenase n=1 Tax=Burkholderia vietnamiensis AU4i RepID=U2G400_BURVI
Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}; TaxID=1435057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens LBA4213 (Ach5).;"
SCNpilot_cont_300_bf_scaffold_347_curated_106
Agrobacterium arsenijevicii, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(132633..133406)
DNA (774bp) protein (258aa)
short-chain dehydrogenase n=1 Tax=Rhizobium leguminosarum RepID=UPI0003665D84
Short-chain dehydrogenase {ECO:0000313|EMBL:KJF72570.1}; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. KFB 330.;"
short-chain dehydrogenase/reductase SDR
SCNpilot_cont_300_bf_scaffold_347_curated_107
Agrobacterium arsenijevicii, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

133548..134447
DNA (900bp) protein (300aa)
LysR family transcriptional regulator n=1 Tax=Rhizobium leguminosarum RepID=UPI000378BC83
LysR family transcriptional regulator {ECO:0000313|EMBL:KJF72569.1}; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. KFB 330.;"
LysR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_347_curated_108
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(134764..135636)
DNA (873bp) protein (291aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2INX9_9SPHN
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
SCNpilot_cont_300_bf_scaffold_347_curated_109
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(135695..136036)
DNA (342bp) protein (114aa)
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
SCNpilot_cont_300_bf_scaffold_347_curated_110
Cupriavidus pinatubonensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(136033..137601)
DNA (1569bp) protein (523aa)
Monooxygenase, FAD-binding:FAD dependent oxidoreductase n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46MT6_CUPPJ
monooxygenase, FAD-binding:FAD dependent oxidoreductase
Monooxygenase, FAD-binding:FAD dependent oxidoreductase {ECO:0000313|EMBL:AAZ65539.1}; TaxID=264198 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) (Ralstonia; eutropha (strain JMP 134)).;"
SCNpilot_cont_300_bf_scaffold_347_curated_111
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(137631..138383)
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034D7D52
Uncharacterized protein {ECO:0000313|EMBL:KHQ99542.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_347_curated_112
Achromobacter arsenitoxydans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(139037..140080)
DNA (1044bp) protein (348aa)
Extra-cytoplasmic solute receptor protein n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0F138_9BURK
hypothetical protein
Extra-cytoplasmic solute receptor protein {ECO:0000313|EMBL:EHK68076.1}; TaxID=477184 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter arsenitoxydans SY8.;"
SCNpilot_cont_300_bf_scaffold_347_curated_113
Burkholderia sp. Ch1-1, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

140260..141015
DNA (756bp) protein (252aa)
Transcriptional regulator n=1 Tax=Burkholderia sp. Ch1-1 RepID=I2IMR0_9BURK
Transcriptional regulator {ECO:0000313|EMBL:EIF32012.1}; TaxID=243261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. Ch1-1.;"
Transcriptional regulator
SCNpilot_cont_300_bf_scaffold_347_curated_114
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

141353..142786
DNA (1434bp) protein (478aa)
mhpA; 3-(3-hydroxyphenyl)propionate hydroxylase; K05712 3-(3-hydroxy-phenyl)propionate hydroxylase [EC:1.14.13.127]
Monooxygenase FAD-binding n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K5C7_AGRVS
Monooxygenase FAD-binding {ECO:0000313|EMBL:ACM40075.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;"
SCNpilot_cont_300_bf_scaffold_347_curated_115
Burkholderia cepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

142783..143955
DNA (1173bp) protein (391aa)
dipeptidyl aminopeptidase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034BE90B
Dipeptidyl aminopeptidase {ECO:0000313|EMBL:KER71534.1}; TaxID=292 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cepacia (Pseudomonas cepacia).;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_347_curated_116
unknown

Not on your lists

comp(144084..144266)
DNA (183bp) protein (61aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_347_curated_117
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

144396..144974
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00036151F1
Bradyrhizobium elkanii strain UASWS1015 Contig185, whole genome shotgun sequence {ECO:0000313|EMBL:KIU44967.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
putative biphenyl-2,3-diol 1,2-dioxygenase
SCNpilot_cont_300_bf_scaffold_347_curated_118
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(145021..145992)
DNA (972bp) protein (324aa)
amidohydrolase 2; K14333 2,3-dihydroxybenzoate decarboxylase [EC:4.1.1.46]
Gamma-resorcylate decarboxylase n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12BV1_POLSJ
Gamma-resorcylate decarboxylase {ECO:0000313|EMBL:ABE43991.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
SCNpilot_cont_300_bf_scaffold_347_curated_119
RIFCSPLOWO2_12_FULL_Gammaproteobacteria_52_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(146040..147419)
DNA (1380bp) protein (460aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002D623B8
major facilitator transporter
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_52_10_curated
SCNpilot_cont_300_bf_scaffold_347_curated_120
Streptomyces violaceusniger, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(147470..148654)
DNA (1185bp) protein (395aa)
dipeptidyl aminopeptidase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034BE90B
dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein
Dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein {ECO:0000313|EMBL:AEM84351.1}; TaxID=653045 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces violaceusniger Tu 4113.;"
Displaying items 91-120 of 128 in total

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