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SCNpilot_cont_300_bf_scaffold_347_curated

Search features with annotation key words

Displaying items 61-90 of 128 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_347_curated_61

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84212..84937
DNA (726bp) protein (242aa)
hypothetical protein n=1 Tax=Rhizobium RepID=UPI0003796893
Uncharacterized protein {ECO:0000313|EMBL:KKN30988.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_347_curated_62
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

85266..88601
DNA (3336bp) protein (1112aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens CCNWGS0286 RepID=G6XZ23_RHIRD
Uncharacterized protein {ECO:0000313|EMBL:EHH03909.1}; TaxID=1082932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens CCNWGS0286.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_347_curated_63
Marinobacter hydrocarbonoclasticus, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(88827..89957)
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) RepID=A1U3A1_MARAV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM19470.1}; TaxID=351348 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter hydrocarbonoclasticus (strain ATCC 700491 / DSM 11845 /; VT8).;"
SCNpilot_cont_300_bf_scaffold_347_curated_64
unknown

Not on your lists

90803..91024
DNA (222bp) protein (74aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_347_curated_65
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

91256..91513
DNA (258bp) protein (86aa)
transcription factor n=1 Tax=Sinorhizobium medicae RepID=UPI0003625895
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR64196.1}; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;"
SCNpilot_cont_300_bf_scaffold_347_curated_66
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

91510..91917
DNA (408bp) protein (136aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;"
Ribonuclease VapC n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JNU2_AGRRK
hypothetical protein
SCNpilot_cont_300_bf_scaffold_347_curated_67
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

91979..92998
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NEN9_AFIFE
Integrase {ECO:0000313|EMBL:KIZ39782.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
phage integrase
SCNpilot_cont_300_bf_scaffold_347_curated_68
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

93571..94503
DNA (933bp) protein (311aa)
Putative replication protein A n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EU56_BRASB
putative replication protein A
Putative replication protein A {ECO:0000313|EMBL:ABQ39700.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
SCNpilot_cont_300_bf_scaffold_347_curated_69
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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94500..95498
DNA (999bp) protein (333aa)
Plasmid partitioning protein RepB n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QVP6_9BRAD
Plasmid partitioning protein RepB {ECO:0000313|EMBL:BAR63539.1}; TaxID=1355477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens.;"
ParB family protein
SCNpilot_cont_300_bf_scaffold_347_curated_70
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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95729..96964
DNA (1236bp) protein (412aa)
Replication protein C n=2 Tax=Oligotropha carboxidovorans RepID=B6JK21_OLICO
repC2; replication protein C
Replication protein C {ECO:0000313|EMBL:AEI08202.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_cont_300_bf_scaffold_347_curated_71
Oscillatoria nigro-viridis, Oscillatoria, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

98335..100632
DNA (2298bp) protein (766aa)
hypothetical protein n=1 Tax=Sinorhizobium medicae RepID=UPI00035ECEA6
serine/threonine protein kinase
Serine/threonine protein kinase {ECO:0000313|EMBL:AFZ10474.1}; TaxID=179408 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Oscillatoria.;" source="Oscillatoria nigro-viridis PCC 7112.;"
SCNpilot_cont_300_bf_scaffold_347_curated_72
Oscillatoria nigro-viridis, Oscillatoria, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

100629..101213
DNA (585bp) protein (195aa)
hypothetical protein n=1 Tax=Sinorhizobium medicae RepID=UPI00035ECEA6
serine/threonine protein kinase
Serine/threonine protein kinase {ECO:0000313|EMBL:AFZ10474.1}; TaxID=179408 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Oscillatoria.;" source="Oscillatoria nigro-viridis PCC 7112.;"
SCNpilot_cont_300_bf_scaffold_347_curated_73
Oscillatoria nigro-viridis, Oscillatoria, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

101276..101623
DNA (348bp) protein (116aa)
hypothetical protein n=1 Tax=Sinorhizobium medicae RepID=UPI00035ECEA6
serine/threonine protein kinase
Serine/threonine protein kinase {ECO:0000313|EMBL:AFZ10474.1}; TaxID=179408 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Oscillatoria.;" source="Oscillatoria nigro-viridis PCC 7112.;"
SCNpilot_cont_300_bf_scaffold_347_curated_74
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

101620..102165
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Sinorhizobium medicae RepID=UPI000374EA14
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ22019.1}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 7113.;"
SCNpilot_cont_300_bf_scaffold_347_curated_75
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

102162..103046
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WQE4_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ22019.1}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 7113.;"
SCNpilot_cont_300_bf_scaffold_347_curated_76
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

103039..103782
DNA (744bp) protein (248aa)
protein phosphatase; K01090 protein phosphatase [EC:3.1.3.16]
Protein phosphatase 2C-like n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WR77_9BRAD
Protein phosphatase 2C-like {ECO:0000313|EMBL:EAQ37510.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
SCNpilot_cont_300_bf_scaffold_347_curated_77
unknown

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comp(103802..104083)
DNA (282bp) protein (94aa)
hypothetical protein n=1 Tax=Rhizobium meliloti RepID=UPI0003780256
SCNpilot_cont_300_bf_scaffold_347_curated_78
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

104641..105600
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Methylobacterium sp. GXF4 RepID=I9CGX2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFL30601.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_347_curated_79
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

105593..105835
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Methylobacterium sp. GXF4 RepID=I9WSC4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFL30600.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_347_curated_80
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

105825..107540
DNA (1716bp) protein (572aa)
Uncharacterized protein n=1 Tax=Methylobacterium sp. GXF4 RepID=I9LF26_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFL30599.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_347_curated_81
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(107804..108406)
DNA (603bp) protein (201aa)
NADPH-dependent FMN reductase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HRS5_PARL1
NADPH-dependent FMN reductase
NADPH-dependent FMN reductase {ECO:0000313|EMBL:ABS62608.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCNpilot_cont_300_bf_scaffold_347_curated_82
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(108403..109077)
DNA (675bp) protein (225aa)
Transcriptional regulator, TetR family n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CUT6_VARPS
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ACS18514.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
SCNpilot_cont_300_bf_scaffold_347_curated_83
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

109459..110616
DNA (1158bp) protein (386aa)
hypothetical protein n=1 Tax=Gordonia kroppenstedtii RepID=UPI00035D652A
peptidase M24
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
SCNpilot_cont_300_bf_scaffold_347_curated_84
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

110700..111878
DNA (1179bp) protein (393aa)
Extracellular ligand-binding receptor n=1 Tax=Pandoraea sp. SD6-2 RepID=R7X203_9BURK
Extracellular ligand-binding receptor {ECO:0000313|EMBL:EON13566.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein
SCNpilot_cont_300_bf_scaffold_347_curated_85
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

111903..112772
DNA (870bp) protein (290aa)
Inner-membrane translocator n=1 Tax=Oceanibaculum indicum P24 RepID=K2K0M3_9PROT
Inner-membrane translocator {ECO:0000313|EMBL:EKE76299.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein
SCNpilot_cont_300_bf_scaffold_347_curated_86
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

112765..113775
DNA (1011bp) protein (337aa)
ABC superfamily ATP binding cassette transporter, permease protein n=1 Tax=Magnetospirillum sp. SO-1 RepID=M3A929_9PROT
ABC transporter permease {ECO:0000313|EMBL:KJB97445.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
putative branched-chain amino acid ABC transporter, permease protein
SCNpilot_cont_300_bf_scaffold_347_curated_87
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

113775..114539
DNA (765bp) protein (255aa)
ABC-type branched-chain amino acid transport system, ATPase component n=1 Tax=Microvirga sp. WSM3557 RepID=I4YW25_9RHIZ
branched-chain amino acid ABC transporter,ATP-binding component
Tax=RBG_16_Betaproteobacteria_66_20_curated
SCNpilot_cont_300_bf_scaffold_347_curated_88
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

114523..115221
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=SAR324 cluster bacterium SCGC AB-629-O05 RepID=UPI000373F62E
putative branched-chain amino acid ABC transporter ATP-binding protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_347_curated_89
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

115490..115756
DNA (267bp) protein (89aa)
hypothetical protein n=1 Tax=Microbulbifer variabilis RepID=UPI0003723620
cupin
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
SCNpilot_cont_300_bf_scaffold_347_curated_90
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

115892..117016
DNA (1125bp) protein (375aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EJC4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EZP67739.1}; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis (Pseudomonas paucimobilis).;"
putative alkanesulfonate monooxygenase
Displaying items 61-90 of 128 in total

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