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SCNpilot_cont_300_bf_scaffold_432_curated

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Displaying items 1-30 of 234 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_432_curated_1
bacterium YEK0313, Bacteria

Not on your lists

3..209
DNA (207bp) protein (69aa)
ABC transporter, substrate binding protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TIY9_9PROT
NMT1/THI5 like protein {ECO:0000313|EMBL:CEJ11029.1}; Flags: Precursor;; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
SCNpilot_cont_300_bf_scaffold_432_curated_2
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

304..2007
DNA (1704bp) protein (568aa)
Acetyl-coenzyme A synthetase {ECO:0000313|EMBL:KFC72193.1}; EC=6.2.1.1 {ECO:0000313|EMBL:KFC72193.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
AMP-dependent synthetase and ligase; K01895 acetyl-CoA synthetase [EC:6.2.1.1]
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002D4AE00
SCNpilot_cont_300_bf_scaffold_432_curated_3
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2022..3218)
DNA (1197bp) protein (399aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000379C7C9
Uncharacterized protein {ECO:0000313|EMBL:KGF69963.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
N-acetyltransferase family protein
SCNpilot_cont_300_bf_scaffold_432_curated_4
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3308..4318)
DNA (1011bp) protein (337aa)
ATP-binding protein n=1 Tax=Methylobacterium sp. 88A RepID=UPI00035ECFE7
cobalamin synthesis protein P47K
Cobalamin synthesis protein P47K {ECO:0000313|EMBL:ACL60283.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
SCNpilot_cont_300_bf_scaffold_432_curated_5
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4347..5234)
DNA (888bp) protein (296aa)
Putative permease, DMT superfamily n=1 Tax=Microvirga sp. WSM3557 RepID=I4YMI3_9RHIZ
Putative permease, DMT superfamily {ECO:0000313|EMBL:EIM25175.1}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
putative permease, DMT superfamily
SCNpilot_cont_300_bf_scaffold_432_curated_6
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5339..6919)
DNA (1581bp) protein (527aa)
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:KFC72196.1}; EC=3.4.16.4 {ECO:0000313|EMBL:KFC72196.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4); K01286 D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000362B836
SCNpilot_cont_300_bf_scaffold_432_curated_7
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7141..8040
DNA (900bp) protein (300aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F82BFD
DMT superfamily permease
Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
SCNpilot_cont_300_bf_scaffold_432_curated_8
bacterium YEK0313, Bacteria

Not on your lists

8097..9263
DNA (1167bp) protein (389aa)
Propanoyl-CoA C-acyltransferase (EC:2.3.1.176); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
acetyl-CoA acetyltransferase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F1367A
3-ketoacyl-CoA thiolase {ECO:0000313|EMBL:CEJ11152.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
SCNpilot_cont_300_bf_scaffold_432_curated_9
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9337..10551
DNA (1215bp) protein (405aa)
Major facilitator superfamily MFS_1 n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IG24_METNO
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:KFC72204.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
major facilitator superfamily protein
SCNpilot_cont_300_bf_scaffold_432_curated_10
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10642..10908)
DNA (267bp) protein (89aa)
BolA family protein n=1 Tax=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) RepID=B6JA02_OLICO
BolA family protein; K05527 BolA protein
Uncharacterized protein {ECO:0000313|EMBL:EKS30644.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
SCNpilot_cont_300_bf_scaffold_432_curated_11
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11118..11531
DNA (414bp) protein (138aa)
Heat shock protein DnaJ domain protein n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UC02_METS4
heat shock protein DnaJ domain-containing protein
Heat shock protein DnaJ domain protein {ECO:0000313|EMBL:ACA20753.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
SCNpilot_cont_300_bf_scaffold_432_curated_12
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11803..12792
DNA (990bp) protein (330aa)
cobalt chelatase small subunit (EC:6.6.1.2); K09882 cobaltochelatase CobS [EC:6.6.1.2]
Cobalt chelatase, pCobS small subunit {ECO:0000313|EMBL:ACL61498.1}; EC=6.6.1.2 {ECO:0000313|EMBL:ACL61498.1};; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
Cobalt chelatase, pCobS small subunit n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IG21_METNO
SCNpilot_cont_300_bf_scaffold_432_curated_13
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12848..13108
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00036825F4
Glutathione-dependent formaldehyde-activating, GFA {ECO:0000313|EMBL:EYF04213.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_432_curated_14
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13128..15029
DNA (1902bp) protein (634aa)
Cobaltochelatase CobT subunit {ECO:0000313|EMBL:KFC73241.1}; EC=6.6.1.2 {ECO:0000313|EMBL:KFC73241.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
cobalt chelatase large subunit (EC:6.6.1.2); K09883 cobaltochelatase CobT [EC:6.6.1.2]
Cobaltochelatase, CobT subunit n=1 Tax=Microvirga sp. WSM3557 RepID=I4YMH3_9RHIZ
SCNpilot_cont_300_bf_scaffold_432_curated_15
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15026..16045
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0S855_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KFC73240.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
conserved exported hypothetical protein
SCNpilot_cont_300_bf_scaffold_432_curated_16
Silicibacter sp. TrichCH4B, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(16151..16444)
DNA (294bp) protein (98aa)
50S ribosomal protein L28 n=1 Tax=Methylocystis parvus RepID=UPI0002E8EE12
rpmB; 50S ribosomal protein L28
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=644076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Silicibacter sp. TrichCH4B.;"
SCNpilot_cont_300_bf_scaffold_432_curated_17
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16583..17254)
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PGI2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS39869.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_432_curated_18
Methylobacterium radiotolerans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17339..18166
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1LWX3_METRJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB25678.1}; Flags: Precursor;; TaxID=426355 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM; 2831).;"
SCNpilot_cont_300_bf_scaffold_432_curated_19
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18800..22165
DNA (3366bp) protein (1122aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003820153
Helicase-like protein {ECO:0000313|EMBL:KFC73237.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
helicase domain-containing protein
SCNpilot_cont_300_bf_scaffold_432_curated_20
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22252..22524
DNA (273bp) protein (91aa)
RNA-binding protein S4 n=1 Tax=Hoeflea sp. 108 RepID=UPI00037E4A6B
Uncharacterized protein {ECO:0000313|EMBL:CDX23473.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
RNA-binding S4 domain-containing protein; K04762 ribosome-associated heat shock protein Hsp15
SCNpilot_cont_300_bf_scaffold_432_curated_21
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22627..22965
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0003025A90
4Fe-4S ferredoxin, iron-sulfur binding {ECO:0000313|EMBL:CDP51841.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
ferredoxin; K05524 ferredoxin
SCNpilot_cont_300_bf_scaffold_432_curated_22
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23287..23946
DNA (660bp) protein (220aa)
CarD family transcriptional regulator n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002FB2117
carD family transcriptional regulator; K07736 CarD family transcriptional regulator
Transcriptional regulator, CarD family {ECO:0000313|EMBL:CAX26481.1}; TaxID=661410 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain DSM 5838 / DM4) (Methylobacterium; dichloromethanicum (strain DM4)).;"
SCNpilot_cont_300_bf_scaffold_432_curated_23
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24086..24499
DNA (414bp) protein (138aa)
thioesterase superfamily protein; K10806 acyl-CoA thioesterase YciA [EC:3.1.2.-]
Thioesterase superfamily protein n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UN72_METS4
Thioesterase superfamily protein {ECO:0000313|EMBL:ACA14615.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
SCNpilot_cont_300_bf_scaffold_432_curated_24
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24533..25012)
DNA (480bp) protein (160aa)
Transcriptional regulator, MarR family n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8WZE0_ACISM
Uncharacterized protein {ECO:0000313|EMBL:KFG67194.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
MarR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_432_curated_25
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25058..26521)
DNA (1464bp) protein (488aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00036B0483
Methylobacterium aquaticum DNA, complete genome, strain: MA-22A {ECO:0000313|EMBL:BAQ47574.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
peptidase M48 Ste24p
SCNpilot_cont_300_bf_scaffold_432_curated_26
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26518..27183)
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00030FF68C
Uncharacterized protein {ECO:0000313|EMBL:ESR24123.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
nuclease (SNase-like)
SCNpilot_cont_300_bf_scaffold_432_curated_27
Burkholderia sacchari, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27405..28373
DNA (969bp) protein (323aa)
2-dehydropantoate 2-reductase (EC:1.1.1.169); K00077 2-dehydropantoate 2-reductase [EC:1.1.1.169]
Putative 2-dehydropantoate 2-reductase n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F7J8_9RHIZ
2-dehydropantoate 2-reductase {ECO:0000313|EMBL:KHD19588.1}; TaxID=159450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sacchari.;"
SCNpilot_cont_300_bf_scaffold_432_curated_28
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28689..29360)
DNA (672bp) protein (224aa)
PEP-CTERM protein sorting domain protein {ECO:0000313|EMBL:KFC73716.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
SCNpilot_cont_300_bf_scaffold_432_curated_29
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29608..29958
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YM47_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EIM25039.1}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
SCNpilot_cont_300_bf_scaffold_432_curated_30
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30055..30756)
DNA (702bp) protein (234aa)
glutathione S-transferase; K00799 glutathione S-transferase [EC:2.5.1.18]
glutathione S-transferase n=1 Tax=Caulobacter sp. JGI 0001013-O16 RepID=UPI00037EFBCB
Putative glutathione S-transferase enzyme with thioredoxin-like domain protein {ECO:0000313|EMBL:KFC70468.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Displaying items 1-30 of 234 in total

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